Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:24598639-24828921

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ripor2 13 24582189 to 24733816 151627 + protein coding gene RHO family interacting cell polarization regulator 2
Gm11346 13 24598124 to 24604767 6643 - pseudogene predicted gene 11346
Tssr121795 13 24599533 to 24599541 8 - TSS region transcription start site region 121795
Tssr118920 13 24603244 to 24603252 8 + TSS region transcription start site region 118920
Tssr121796 13 24603794 to 24603805 11 - TSS region transcription start site region 121796
Tssr121797 13 24603859 to 24603867 8 - TSS region transcription start site region 121797
Tssr121798 13 24603868 to 24603886 18 - TSS region transcription start site region 121798
Tssr121799 13 24603892 to 24603904 12 - TSS region transcription start site region 121799
Tssr121800 13 24604214 to 24604231 17 - TSS region transcription start site region 121800
Tssr121801 13 24604789 to 24604795 6 - TSS region transcription start site region 121801
Cpgi5381 13 24604849 to 24605062 213 CpG island CpG island 5381
Tssr118921 13 24605078 to 24605081 3 + TSS region transcription start site region 118921
Tssr121802 13 24613614 to 24613623 9 - TSS region transcription start site region 121802
Tssr121803 13 24613650 to 24613678 28 - TSS region transcription start site region 121803
Tssr4018 13 24614085 to 24614093 8 - TSS region transcription start site region 4018
Tssr118922 13 24614205 to 24614214 9 + TSS region transcription start site region 118922
Tssr118923 13 24614218 to 24614244 26 + TSS region transcription start site region 118923
Tssr118924 13 24614576 to 24614583 7 + TSS region transcription start site region 118924
Tssr118925 13 24614588 to 24614603 15 + TSS region transcription start site region 118925
Tssr118926 13 24614608 to 24614634 26 + TSS region transcription start site region 118926
Tssr118927 13 24616859 to 24616865 6 + TSS region transcription start site region 118927
C530050E15Rik 13 24631918 to 24638567 6649 - lincRNA gene RIKEN cDNA C530050E15 gene
Tssr118928 13 24633464 to 24633477 13 + TSS region transcription start site region 118928
Tssr118929 13 24633582 to 24633604 22 + TSS region transcription start site region 118929
Tssr121804 13 24634426 to 24634449 23 - TSS region transcription start site region 121804
Tssr4019 13 24634657 to 24634667 10 + TSS region transcription start site region 4019
Tssr118930 13 24634677 to 24634684 7 + TSS region transcription start site region 118930
Tssr121805 13 24635916 to 24635924 8 - TSS region transcription start site region 121805
Tssr118931 13 24636028 to 24636030 2 + TSS region transcription start site region 118931
Tssr118932 13 24636093 to 24636094 1 + TSS region transcription start site region 118932
Cpgi5382 13 24638305 to 24639386 1081 CpG island CpG island 5382
Tssr118933 13 24638484 to 24638510 26 + TSS region transcription start site region 118933
Tssr118934 13 24638636 to 24638736 100 + TSS region transcription start site region 118934
Tssr121806 13 24640299 to 24640310 11 - TSS region transcription start site region 121806
Tssr118935 13 24651434 to 24651438 4 + TSS region transcription start site region 118935
Tssr118936 13 24676823 to 24676838 15 + TSS region transcription start site region 118936
Tssr121807 13 24703497 to 24703538 41 - TSS region transcription start site region 121807
Tssr118937 13 24706074 to 24706089 15 + TSS region transcription start site region 118937
Cpgi5383 13 24713639 to 24713921 282 CpG island CpG island 5383
Tssr118938 13 24721673 to 24721683 10 + TSS region transcription start site region 118938
Tssr118939 13 24721692 to 24721701 9 + TSS region transcription start site region 118939
Tssr118940 13 24722586 to 24722588 2 + TSS region transcription start site region 118940
Tssr118941 13 24729641 to 24729645 4 + TSS region transcription start site region 118941
Tssr118942 13 24741198 to 24741203 5 + TSS region transcription start site region 118942
Tssr118943 13 24741210 to 24741237 27 + TSS region transcription start site region 118943
Armh2 13 24741232 to 24746592 5360 + protein coding gene armadillo-like helical domain containing 2
Gmnn 13 24751845 to 24761923 10078 - protein coding gene geminin
Cpgi5384 13 24761185 to 24762213 1028 CpG island CpG island 5384
Tssr121808 13 24761443 to 24761458 15 - TSS region transcription start site region 121808
Tssr118944 13 24761550 to 24761594 44 + TSS region transcription start site region 118944
Tssr121809 13 24761875 to 24761950 75 - TSS region transcription start site region 121809
Tssr118945 13 24773100 to 24773104 4 + TSS region transcription start site region 118945
Cpgi5385 13 24799931 to 24800365 434 CpG island CpG island 5385
Cpgi5386 13 24800648 to 24802431 1783 CpG island CpG island 5386
Tssr121810 13 24800752 to 24800772 20 - TSS region transcription start site region 121810
Tssr121811 13 24800778 to 24800789 11 - TSS region transcription start site region 121811
Tssr118946 13 24801137 to 24801158 21 + TSS region transcription start site region 118946
Tssr118947 13 24801171 to 24801184 13 + TSS region transcription start site region 118947
Tssr118948 13 24801194 to 24801213 19 + TSS region transcription start site region 118948
Tssr118949 13 24801332 to 24801339 7 + TSS region transcription start site region 118949
BC005537 13 24801657 to 24812899 11242 + protein coding gene cDNA sequence BC005537
Tssr118950 13 24802857 to 24802867 10 + TSS region transcription start site region 118950
Tssr118951 13 24802869 to 24802893 24 + TSS region transcription start site region 118951
Tssr118952 13 24802957 to 24802972 15 + TSS region transcription start site region 118952
Tssr118953 13 24802991 to 24803008 17 + TSS region transcription start site region 118953
Tssr118954 13 24803018 to 24803035 17 + TSS region transcription start site region 118954
Tssr118955 13 24803351 to 24803367 16 + TSS region transcription start site region 118955
Tssr118956 13 24803701 to 24803713 12 + TSS region transcription start site region 118956
Tssr118957 13 24804909 to 24804929 20 + TSS region transcription start site region 118957
Tssr118958 13 24806927 to 24806932 5 + TSS region transcription start site region 118958
Gm22358 13 24811447 to 24811568 121 - snoRNA gene predicted gene, 22358
Tssr118959 13 24812711 to 24812722 11 + TSS region transcription start site region 118959
Tssr118960 13 24813336 to 24813352 16 + TSS region transcription start site region 118960
Tssr118961 13 24813398 to 24813451 53 + TSS region transcription start site region 118961
Tssr118962 13 24813454 to 24813487 33 + TSS region transcription start site region 118962
Tssr118963 13 24813492 to 24813505 13 + TSS region transcription start site region 118963
Tssr118964 13 24813506 to 24813522 16 + TSS region transcription start site region 118964
Tssr118965 13 24813533 to 24813544 11 + TSS region transcription start site region 118965
Tssr118966 13 24813554 to 24813570 16 + TSS region transcription start site region 118966
Tssr118967 13 24813667 to 24813713 46 + TSS region transcription start site region 118967
Tssr118968 13 24813729 to 24813762 33 + TSS region transcription start site region 118968
Tssr118969 13 24814047 to 24814052 5 + TSS region transcription start site region 118969
Acot13 13 24817955 to 24831489 13534 - protein coding gene acyl-CoA thioesterase 13