Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:23986224-24576277

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scgn 13 23953456 to 23991214 37758 - protein coding gene secretagogin, EF-hand calcium binding protein
Cpgi5379 13 23990914 to 23991353 439 CpG island CpG island 5379
Tssr121763 13 23991158 to 23991181 23 - TSS region transcription start site region 121763
Carmil1 13 24012481 to 24280790 268309 - protein coding gene capping protein regulator and myosin 1 linker 1
Tssr4014 13 24024423 to 24024428 5 + TSS region transcription start site region 4014
D13Ertd224e 13 24057899 to 24058110 211 DNA segment DNA segment, Chr 13, ERATO Doi 224, expressed
Tssr121764 13 24059289 to 24059313 24 - TSS region transcription start site region 121764
Tssr121765 13 24059320 to 24059324 4 - TSS region transcription start site region 121765
4933427I18Rik 13 24059424 to 24067677 8253 protein coding gene RIKEN cDNA 4933427I18 gene
Tssr121766 13 24094464 to 24094539 75 - TSS region transcription start site region 121766
Tssr118885 13 24104298 to 24104342 44 + TSS region transcription start site region 118885
Tssr118886 13 24104364 to 24104373 9 + TSS region transcription start site region 118886
Tssr118887 13 24105566 to 24105579 13 + TSS region transcription start site region 118887
Tssr118888 13 24105602 to 24105613 11 + TSS region transcription start site region 118888
Tssr121767 13 24135084 to 24135097 13 - TSS region transcription start site region 121767
Tssr121768 13 24155203 to 24155216 13 - TSS region transcription start site region 121768
Tssr118889 13 24159913 to 24159922 9 + TSS region transcription start site region 118889
Tssr121769 13 24178249 to 24178253 4 - TSS region transcription start site region 121769
Gm33573 13 24178265 to 24189252 10987 + lncRNA gene predicted gene, 33573
Gm11343 13 24195897 to 24196495 598 + pseudogene predicted gene 11343
Tssr121770 13 24206237 to 24206254 17 - TSS region transcription start site region 121770
Tssr121771 13 24206260 to 24206269 9 - TSS region transcription start site region 121771
Tssr121772 13 24206281 to 24206295 14 - TSS region transcription start site region 121772
Tssr121773 13 24222145 to 24222148 3 - TSS region transcription start site region 121773
Tssr121774 13 24257801 to 24257804 3 - TSS region transcription start site region 121774
Tssr121775 13 24272856 to 24272860 4 - TSS region transcription start site region 121775
Cpgi5380 13 24279993 to 24281559 1566 CpG island CpG island 5380
Tssr121776 13 24280765 to 24280778 13 - TSS region transcription start site region 121776
Tssr121777 13 24280948 to 24280995 47 - TSS region transcription start site region 121777
Tssr121778 13 24281224 to 24281277 53 - TSS region transcription start site region 121778
Tssr121779 13 24281292 to 24281325 33 - TSS region transcription start site region 121779
Gm11340 13 24291394 to 24291805 411 - pseudogene predicted gene 11340
Gm23340 13 24316730 to 24316852 122 - snoRNA gene predicted gene, 23340
Gm11341 13 24320302 to 24320748 446 + pseudogene predicted gene 11341
Gm11342 13 24324108 to 24371760 47652 - antisense lncRNA gene predicted gene 11342
Tssr4015 13 24327251 to 24327271 20 + TSS region transcription start site region 4015
Cmah 13 24327404 to 24477289 149885 + protein coding gene cytidine monophospho-N-acetylneuraminic acid hydroxylase
Tssr118890 13 24327415 to 24327461 46 + TSS region transcription start site region 118890
Tssr121780 13 24329023 to 24329035 12 - TSS region transcription start site region 121780
Tssr121781 13 24329045 to 24329052 7 - TSS region transcription start site region 121781
Tssr121782 13 24329124 to 24329147 23 - TSS region transcription start site region 121782
Tssr121783 13 24330205 to 24330218 13 - TSS region transcription start site region 121783
Tssr118891 13 24373511 to 24373517 6 + TSS region transcription start site region 118891
Tssr121784 13 24375942 to 24375959 17 - TSS region transcription start site region 121784
Tssr121785 13 24375962 to 24375972 10 - TSS region transcription start site region 121785
Tssr121786 13 24376022 to 24376033 11 - TSS region transcription start site region 121786
Tssr118892 13 24376034 to 24376045 11 + TSS region transcription start site region 118892
Tssr4016 13 24376050 to 24376061 11 + TSS region transcription start site region 4016
Tssr118893 13 24376070 to 24376109 39 + TSS region transcription start site region 118893
Tssr118894 13 24376134 to 24376145 11 + TSS region transcription start site region 118894
Tssr118895 13 24376168 to 24376197 29 + TSS region transcription start site region 118895
Tssr121787 13 24384019 to 24384061 42 - TSS region transcription start site region 121787
Tssr121788 13 24391655 to 24391657 2 - TSS region transcription start site region 121788
Tssr118896 13 24395256 to 24395279 23 + TSS region transcription start site region 118896
Tssr118897 13 24397380 to 24397391 11 + TSS region transcription start site region 118897
Tssr118898 13 24397411 to 24397422 11 + TSS region transcription start site region 118898
Tssr118899 13 24397426 to 24397436 10 + TSS region transcription start site region 118899
D13Mit15 13 24399952 to 24400094 142 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 15
Tssr121789 13 24400345 to 24400346 1 - TSS region transcription start site region 121789
Gm11344 13 24410106 to 24410440 334 - pseudogene predicted gene 11344
Tssr118900 13 24414501 to 24414518 17 + TSS region transcription start site region 118900
Tssr121790 13 24414798 to 24414814 16 - TSS region transcription start site region 121790
Tssr121791 13 24414934 to 24414947 13 - TSS region transcription start site region 121791
Tssr121792 13 24414961 to 24414980 19 - TSS region transcription start site region 121792
Tssr121793 13 24415001 to 24415008 7 - TSS region transcription start site region 121793
Tssr118901 13 24415104 to 24415123 19 + TSS region transcription start site region 118901
Tssr121794 13 24415490 to 24415501 11 - TSS region transcription start site region 121794
Tssr118902 13 24416171 to 24416180 9 + TSS region transcription start site region 118902
Tssr118903 13 24416628 to 24416668 40 + TSS region transcription start site region 118903
Tssr118904 13 24416741 to 24416750 9 + TSS region transcription start site region 118904
Tssr118905 13 24416878 to 24416951 73 + TSS region transcription start site region 118905
Tssr118906 13 24416975 to 24416982 7 + TSS region transcription start site region 118906
Tssr4017 13 24417128 to 24417139 11 + TSS region transcription start site region 4017
Tssr118907 13 24417654 to 24417677 23 + TSS region transcription start site region 118907
Tssr118908 13 24434067 to 24434076 9 + TSS region transcription start site region 118908
Gm22013 13 24486662 to 24486764 102 - snRNA gene predicted gene, 22013
Tssr118909 13 24487272 to 24487322 50 + TSS region transcription start site region 118909
Tssr118910 13 24487831 to 24487838 7 + TSS region transcription start site region 118910
Tssr118911 13 24501539 to 24501576 37 + TSS region transcription start site region 118911
Tssr118912 13 24501577 to 24501598 21 + TSS region transcription start site region 118912
Tssr118913 13 24501613 to 24501625 12 + TSS region transcription start site region 118913
Tssr118914 13 24514941 to 24514944 3 + TSS region transcription start site region 118914
Tssr118915 13 24518197 to 24518229 32 + TSS region transcription start site region 118915
Tssr118916 13 24562941 to 24562942 1 + TSS region transcription start site region 118916
Tssr118917 13 24575557 to 24575569 12 + TSS region transcription start site region 118917
Tssr118918 13 24575573 to 24575585 12 + TSS region transcription start site region 118918