MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:23894210-23974225

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Slc17a1	13	23867750 to 23895730	27980	+	protein coding gene	solute carrier family 17 (sodium phosphate), member 1
Slc17a4	13	23897879 to 23915009	17130	-	protein coding gene	solute carrier family 17 (sodium phosphate), member 4
Tssr121758	13	23914976 to 23914989	13	-	TSS region	transcription start site region 121758
Tssr121759	13	23914998 to 23915011	13	-	TSS region	transcription start site region 121759
Snrp1c-ps2	13	23923800 to 23924164	364	-	pseudogene	U1 small nuclear ribonucleoprotein 1C, pseudogene 2
Gm33516	13	23933086 to 23949115	16029	+	lncRNA gene	predicted gene, 33516
Hist1h2ba	13	23933773 to 23934156	383	-	protein coding gene	histone cluster 1, H2ba
Tssr121760	13	23934210 to 23934225	15	-	TSS region	transcription start site region 121760
Tssr118883	13	23934434 to 23934439	5	+	TSS region	transcription start site region 118883
Hist1h2aa	13	23934462 to 23934851	389	+	protein coding gene	histone cluster 1, H2aa
Cpgi5378	13	23934467 to 23934884	417		CpG island	CpG island 5378
Gm44344	13	23934707 to 23934835	128	-	miRNA gene	predicted gene, 44344
Scgn	13	23953456 to 23991214	37758	-	protein coding gene	secretagogin, EF-hand calcium binding protein
Gm11339	13	23956809 to 23966175	9366	+	antisense lncRNA gene	predicted gene 11339
Tssr121761	13	23967138 to 23967145	7	-	TSS region	transcription start site region 121761
Tssr121762	13	23967155 to 23967179	24	-	TSS region	transcription start site region 121762
Tssr118884	13	23967281 to 23967287	6	+	TSS region	transcription start site region 118884