Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:23480522-23520594

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Btn2a2	13	23477676 to 23488857	11181	-	protein coding gene	butyrophilin, subfamily 2, member A2
Tssr118822	13	23492274 to 23492284	10	+	TSS region	transcription start site region 118822
Tssr118823	13	23493819 to 23493830	11	+	TSS region	transcription start site region 118823
Tssr118824	13	23493832 to 23493843	11	+	TSS region	transcription start site region 118824
Tssr118825	13	23493845 to 23493857	12	+	TSS region	transcription start site region 118825
n-TWcca3	13	23498106 to 23498177	71	+	tRNA gene	nuclear encoded tRNA trytophan 3 (anticodon CCA)
n-TMcat5	13	23500080 to 23500151	71	+	tRNA gene	nuclear encoded tRNA methionine 5 (anticodon CAT)
n-TRacg4	13	23500522 to 23500594	72	-	tRNA gene	nuclear encoded tRNA arginine 4 (anticodon ACG)
n-TSaga7	13	23500957 to 23501038	81	-	tRNA gene	nuclear encoded tRNA serine 7 (anticodon AGA)
n-TRtcg3	13	23503980 to 23504052	72	-	tRNA gene	nuclear encoded tRNA arginine 3 (anticodon TCG)
n-TWcca4	13	23506519 to 23506590	71	+	tRNA gene	nuclear encoded tRNA trytophan 4 (anticodon CCA)
n-TGgcc6	13	23517203 to 23517273	70	+	tRNA gene	nuclear encoded tRNA glycine 6 (anticodon GCC)
n-TMcat6	13	23517692 to 23517763	71	+	tRNA gene	nuclear encoded tRNA methionine 6 (anticodon CAT)
Cpgi5357	13	23518138 to 23518289	151		CpG island	CpG island 5357
n-TStga1	13	23518146 to 23518227	81	+	tRNA gene	nuclear encoded tRNA serine 1 (anticodon TGA)
n-TQttg4	13	23519050 to 23519121	71	+	tRNA gene	nuclear encoded tRNA glutamine 4 (anticodon TTG)
n-TQttg5	13	23519613 to 23519684	71	+	tRNA gene	nuclear encoded tRNA glutamine 5 (anticodon TTG)