Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:23303525-23395799

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4930557F10Rik	13	23276204 to 23313400	37196	-	lincRNA gene	RIKEN cDNA 4930557F10 gene
n-TVcac11	13	23307629 to 23307701	72	+	tRNA gene	nuclear encoded tRNA valine 11 (anticodon CAC)
n-TIaat9	13	23309052 to 23309125	73	-	tRNA gene	nuclear encoded tRNA isoleucine 9 (anticodon AAT)
4930597G05Rik	13	23309430 to 23310168	738		unclassified gene	RIKEN cDNA 4930597G05 gene
Cpgi5346	13	23309489 to 23309887	398		CpG island	CpG island 5346
Tssr121691	13	23310153 to 23310172	19	-	TSS region	transcription start site region 121691
Cpgi5347	13	23312918 to 23313774	856		CpG island	CpG island 5347
Tssr121692	13	23313354 to 23313361	7	-	TSS region	transcription start site region 121692
Tssr121693	13	23313387 to 23313399	12	-	TSS region	transcription start site region 121693
Tssr121694	13	23313400 to 23313414	14	-	TSS region	transcription start site region 121694
4930586N03Rik	13	23313525 to 23385799	72274	+	antisense lncRNA gene	RIKEN cDNA 4930586N03 gene
n-TMcat12	13	23317466 to 23317538	72	+	tRNA gene	nuclear encoded tRNA methionine 12 (anticodon CAT)
Zfp322a	13	23353103 to 23369208	16105	-	protein coding gene	zinc finger protein 322A
Cpgi5348	13	23368773 to 23369461	688		CpG island	CpG island 5348
Tssr121695	13	23368969 to 23369011	42	-	TSS region	transcription start site region 121695
Tssr121696	13	23369156 to 23369217	61	-	TSS region	transcription start site region 121696
Gm11334	13	23382505 to 23382660	155	+	pseudogene	predicted gene 11334
Cpgi5349	13	23395734 to 23396696	962		CpG island	CpG island 5349