Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:23127373-23308311

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn1r218 13 23136485 to 23137381 896 + protein coding gene vomeronasal 1 receptor 218
Vmn1r-ps129 13 23153310 to 23153828 518 + pseudogene vomeronasal 1 receptor, pseudogene 129
Vmn1r219 13 23162643 to 23163581 938 + protein coding gene vomeronasal 1 receptor 219
Vmn1r-ps130 13 23166611 to 23167053 442 + pseudogene vomeronasal 1 receptor, pseudogene 130
Vmn1r220 13 23183628 to 23184524 896 - protein coding gene vomeronasal 1 receptor 220
Vmn1r-ps131 13 23198348 to 23198597 249 - pseudogene vomeronasal 1 receptor, pseudogene 131
Vmn1r-ps132 13 23201161 to 23202052 891 - pseudogene vomeronasal 1 receptor, pseudogene 132
Vmn1r221 13 23217373 to 23218311 938 + protein coding gene vomeronasal 1 receptor 221
Vmn1r-ps133 13 23228423 to 23228752 329 - pseudogene vomeronasal 1 receptor, pseudogene 133
Vmn1r222 13 23232115 to 23233041 926 - protein coding gene vomeronasal 1 receptor 222
Vmn1r-ps134 13 23241974 to 23242365 391 - pseudogene vomeronasal 1 receptor, pseudogene 134
Vmn1r223 13 23249238 to 23250323 1085 + protein coding gene vomeronasal 1 receptor 223
Gm33094 13 23251097 to 23259019 7922 - lncRNA gene predicted gene, 33094
Tssr118820 13 23260915 to 23260919 4 + TSS region transcription start site region 118820
Gm11331 13 23266534 to 23266821 287 + pseudogene predicted gene 11331
Vmn1r-ps135 13 23268880 to 23269474 594 + pseudogene vomeronasal 1 receptor, pseudogene 135
Cpgi5344 13 23270326 to 23270774 448 CpG island CpG island 5344
n-TIaat15 13 23270421 to 23270516 95 - tRNA gene nuclear encoded tRNA isoleucine 15 (anticodon TAT)
4930557F10Rik 13 23276204 to 23313400 37196 - lincRNA gene RIKEN cDNA 4930557F10 gene
4933404K08Rik 13 23278350 to 23282267 3917 + lincRNA gene RIKEN cDNA 4933404K08 gene
Gm40832 13 23284323 to 23286746 2423 - lncRNA gene predicted gene, 40832
n-TVaac4 13 23285401 to 23285473 72 + tRNA gene nuclear encoded tRNA valine 4 (anticodon AAC)
n-TAagc10 13 23285649 to 23285721 72 + tRNA gene nuclear encoded tRNA alanine 10 (anticodon AGC)
Cpgi5345 13 23286161 to 23286596 435 CpG island CpG island 5345
Gm11333 13 23298049 to 23298196 147 + pseudogene predicted gene 11333
n-TVaac6 13 23298781 to 23298853 72 + tRNA gene nuclear encoded tRNA valine 6 (anticodon AAC)
n-TAagc11 13 23299061 to 23299133 72 + tRNA gene nuclear encoded tRNA alanine 11 (anticodon AGC)
n-TVcac4 13 23300122 to 23300194 72 + tRNA gene nuclear encoded tRNA valine 4 (anticodon CAC)
n-TVcac11 13 23307629 to 23307701 72 + tRNA gene nuclear encoded tRNA valine 11 (anticodon CAC)