Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:22396599-23307495

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn1r-ps103 13 22441272 to 22442164 892 + pseudogene vomeronasal 1 receptor, pseudogene 103
Vmn1r-ps104 13 22449641 to 22450359 718 + pseudogene vomeronasal 1 receptor, pseudogene 104
Gm11298 13 22464296 to 22467854 3558 + pseudogene predicted gene 11298
Vmn1r201 13 22474618 to 22475520 902 + protein coding gene vomeronasal 1 receptor 201
Vmn1r-ps106 13 22480701 to 22482465 1764 + pseudogene vomeronasal 1 receptor, pseudogene 106
Vmn1r-ps107 13 22491605 to 22492185 580 + pseudogene vomeronasal 1 receptor, pseudogene 107
Vmn1r-ps108 13 22496065 to 22496418 353 + pseudogene vomeronasal 1 receptor, pseudogene 108
Vmn1r202 13 22501337 to 22502245 908 - protein coding gene vomeronasal 1 receptor 202
Gm11300 13 22523911 to 22524744 833 - antisense lncRNA gene predicted gene 11300
Vmn1r203 13 22524051 to 22524986 935 + protein coding gene vomeronasal 1 receptor 203
Vmn1r204 13 22556201 to 22557109 908 + protein coding gene vomeronasal 1 receptor 204
Vmn1r205 13 22591980 to 22592930 950 - protein coding gene vomeronasal 1 receptor 205
Vmn1r206 13 22620097 to 22621035 938 - protein coding gene vomeronasal 1 receptor 206
Vmn1r-ps109 13 22625758 to 22626482 724 - pseudogene vomeronasal 1 receptor, pseudogene 109
Vmn1r-ps110 13 22628071 to 22629164 1093 - pseudogene vomeronasal 1 receptor, pseudogene 110
Gm11307 13 22675696 to 22676959 1263 + pseudogene predicted gene 11307
Vmn1r-ps111 13 22691042 to 22691966 924 - pseudogene vomeronasal 1 receptor, pseudogene 111
Gm11309 13 22691299 to 22714987 23688 + antisense lncRNA gene predicted gene 11309
Vmn1r207-ps 13 22725684 to 22726622 938 - pseudogene vomeronasal 1 receptor 207, pseudogene
Vmn1r-ps112 13 22733090 to 22733633 543 - pseudogene vomeronasal 1 receptor, pseudogene 112
Vmn1r-ps113 13 22736988 to 22738093 1105 - pseudogene vomeronasal 1 receptor, pseudogene 113
Gm11313 13 22758927 to 22759358 431 + pseudogene predicted gene 11313
Vmn1r208 13 22772399 to 22773325 926 - protein coding gene vomeronasal 1 receptor 208
Gm11314 13 22772656 to 22773471 815 + antisense lncRNA gene predicted gene 11314
Vmn1r209 13 22805580 to 22806518 938 - protein coding gene vomeronasal 1 receptor 209
Vmn1r210 13 22827194 to 22828114 920 - protein coding gene vomeronasal 1 receptor 210
Vmn1r-ps114 13 22844994 to 22846033 1039 - pseudogene vomeronasal 1 receptor, pseudogene 114
Vmn1r211 13 22851599 to 22852495 896 - protein coding gene vomeronasal 1 receptor 211
Vmn1r-ps115 13 22866640 to 22866806 166 + pseudogene vomeronasal 1 receptor, pseudogene 115
Vmn1r-ps116 13 22875105 to 22875308 203 - pseudogene vomeronasal 1 receptor, pseudogene 116
Gm23774 13 22879377 to 22879507 130 - snoRNA gene predicted gene, 23774
Vmn1r212 13 22883042 to 22884205 1163 - protein coding gene vomeronasal 1 receptor 212
Vmn1r-ps117 13 22898386 to 22898705 319 - pseudogene vomeronasal 1 receptor, pseudogene 117
Gm11320 13 22902362 to 22902824 462 - pseudogene predicted gene 11320
Gm11321 13 22931298 to 22932199 901 - pseudogene predicted gene 11321
Vmn1r-ps120 13 22939860 to 22940179 319 - pseudogene vomeronasal 1 receptor, pseudogene 120
Gm11322 13 22943812 to 22944246 434 - pseudogene predicted gene 11322
Gm11318 13 22960872 to 22961773 901 + pseudogene predicted gene 11318
Vmn1r-ps123 13 22996264 to 22996500 236 - pseudogene vomeronasal 1 receptor, pseudogene 123
Vmn1r213 13 23011249 to 23012403 1154 + protein coding gene vomeronasal 1 receptor 213
Vmn1r-ps124 13 23016210 to 23016366 156 - pseudogene vomeronasal 1 receptor, pseudogene 124
Vmn1r-ps125 13 23023251 to 23023540 289 + pseudogene vomeronasal 1 receptor, pseudogene 125
Vmn1r214 13 23034338 to 23035441 1103 + protein coding gene vomeronasal 1 receptor 214
Gm19153 13 23042416 to 23042994 578 - pseudogene predicted gene, 19153
Vmn1r-ps126 13 23056710 to 23057617 907 + pseudogene vomeronasal 1 receptor, pseudogene 126
Vmn1r215 13 23075792 to 23076694 902 + protein coding gene vomeronasal 1 receptor 215
Vmn1r216 13 23099149 to 23100045 896 + protein coding gene vomeronasal 1 receptor 216
Gm11325 13 23103454 to 23103922 468 + pseudogene predicted gene 11325
Vmn1r-ps127 13 23104348 to 23104790 442 + pseudogene vomeronasal 1 receptor, pseudogene 127
Vmn1r217 13 23113834 to 23118088 4254 - protein coding gene vomeronasal 1 receptor 217
Vmn1r-ps128 13 23124505 to 23126243 1738 + pseudogene vomeronasal 1 receptor, pseudogene 128
Vmn1r218 13 23136485 to 23137381 896 + protein coding gene vomeronasal 1 receptor 218
Vmn1r-ps129 13 23153310 to 23153828 518 + pseudogene vomeronasal 1 receptor, pseudogene 129
Vmn1r219 13 23162643 to 23163581 938 + protein coding gene vomeronasal 1 receptor 219
Vmn1r-ps130 13 23166611 to 23167053 442 + pseudogene vomeronasal 1 receptor, pseudogene 130
Vmn1r220 13 23183628 to 23184524 896 - protein coding gene vomeronasal 1 receptor 220
Vmn1r-ps131 13 23198348 to 23198597 249 - pseudogene vomeronasal 1 receptor, pseudogene 131
Vmn1r-ps132 13 23201161 to 23202052 891 - pseudogene vomeronasal 1 receptor, pseudogene 132
Vmn1r221 13 23217373 to 23218311 938 + protein coding gene vomeronasal 1 receptor 221
Vmn1r-ps133 13 23228423 to 23228752 329 - pseudogene vomeronasal 1 receptor, pseudogene 133
Vmn1r222 13 23232115 to 23233041 926 - protein coding gene vomeronasal 1 receptor 222
Vmn1r-ps134 13 23241974 to 23242365 391 - pseudogene vomeronasal 1 receptor, pseudogene 134
Vmn1r223 13 23249238 to 23250323 1085 + protein coding gene vomeronasal 1 receptor 223
Gm33094 13 23251097 to 23259019 7922 - lncRNA gene predicted gene, 33094
Tssr118820 13 23260915 to 23260919 4 + TSS region transcription start site region 118820
Gm11331 13 23266534 to 23266821 287 + pseudogene predicted gene 11331
Vmn1r-ps135 13 23268880 to 23269474 594 + pseudogene vomeronasal 1 receptor, pseudogene 135
Cpgi5344 13 23270326 to 23270774 448 CpG island CpG island 5344
n-TIaat15 13 23270421 to 23270516 95 - tRNA gene nuclear encoded tRNA isoleucine 15 (anticodon TAT)
4930557F10Rik 13 23276204 to 23313400 37196 - lincRNA gene RIKEN cDNA 4930557F10 gene
4933404K08Rik 13 23278350 to 23282267 3917 + lincRNA gene RIKEN cDNA 4933404K08 gene
Gm40832 13 23284323 to 23286746 2423 - lncRNA gene predicted gene, 40832
n-TVaac4 13 23285401 to 23285473 72 + tRNA gene nuclear encoded tRNA valine 4 (anticodon AAC)
n-TAagc10 13 23285649 to 23285721 72 + tRNA gene nuclear encoded tRNA alanine 10 (anticodon AGC)
Cpgi5345 13 23286161 to 23286596 435 CpG island CpG island 5345
Gm11333 13 23298049 to 23298196 147 + pseudogene predicted gene 11333
n-TVaac6 13 23298781 to 23298853 72 + tRNA gene nuclear encoded tRNA valine 6 (anticodon AAC)
n-TAagc11 13 23299061 to 23299133 72 + tRNA gene nuclear encoded tRNA alanine 11 (anticodon AGC)
n-TVcac4 13 23300122 to 23300194 72 + tRNA gene nuclear encoded tRNA valine 4 (anticodon CAC)