Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:22237194-23418114

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115 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn1r194 13 22244215 to 22245105 890 + protein coding gene vomeronasal 1 receptor 194
Vmn1r195 13 22278317 to 22279404 1087 + protein coding gene vomeronasal 1 receptor 195
Gm11295 13 22282354 to 22283548 1194 + pseudogene predicted gene 11295
Vmn1r196 13 22293193 to 22294098 905 + protein coding gene vomeronasal 1 receptor 196
Vmn1r-ps100 13 22298626 to 22299478 852 - pseudogene vomeronasal 1 receptor, pseudogene 100
Vmn1r197 13 22322191 to 22328807 6616 + protein coding gene vomeronasal 1 receptor 197
Gm48489 13 22336315 to 22336503 188 + pseudogene predicted gene, 48489
Vmn1r198 13 22350555 to 22355248 4693 + protein coding gene vomeronasal 1 receptor 198
Vmn1r-ps101 13 22370571 to 22370832 261 + pseudogene vomeronasal 1 receptor, pseudogene 101
Vmn1r199 13 22382538 to 22383641 1103 + protein coding gene vomeronasal 1 receptor 199
Vmn1r-ps102 13 22385649 to 22386534 885 + pseudogene vomeronasal 1 receptor, pseudogene 102
Vmn1r200 13 22395029 to 22395967 938 + protein coding gene vomeronasal 1 receptor 200
Vmn1r-ps103 13 22441272 to 22442164 892 + pseudogene vomeronasal 1 receptor, pseudogene 103
Vmn1r-ps104 13 22449641 to 22450359 718 + pseudogene vomeronasal 1 receptor, pseudogene 104
Gm11298 13 22464296 to 22467854 3558 + pseudogene predicted gene 11298
Vmn1r201 13 22474618 to 22475520 902 + protein coding gene vomeronasal 1 receptor 201
Vmn1r-ps106 13 22480701 to 22482465 1764 + pseudogene vomeronasal 1 receptor, pseudogene 106
Vmn1r-ps107 13 22491605 to 22492185 580 + pseudogene vomeronasal 1 receptor, pseudogene 107
Vmn1r-ps108 13 22496065 to 22496418 353 + pseudogene vomeronasal 1 receptor, pseudogene 108
Vmn1r202 13 22501337 to 22502245 908 - protein coding gene vomeronasal 1 receptor 202
Gm11300 13 22523911 to 22524744 833 - antisense lncRNA gene predicted gene 11300
Vmn1r203 13 22524051 to 22524986 935 + protein coding gene vomeronasal 1 receptor 203
Vmn1r204 13 22556201 to 22557109 908 + protein coding gene vomeronasal 1 receptor 204
Vmn1r205 13 22591980 to 22592930 950 - protein coding gene vomeronasal 1 receptor 205
Vmn1r206 13 22620097 to 22621035 938 - protein coding gene vomeronasal 1 receptor 206
Vmn1r-ps109 13 22625758 to 22626482 724 - pseudogene vomeronasal 1 receptor, pseudogene 109
Vmn1r-ps110 13 22628071 to 22629164 1093 - pseudogene vomeronasal 1 receptor, pseudogene 110
Gm11307 13 22675696 to 22676959 1263 + pseudogene predicted gene 11307
Vmn1r-ps111 13 22691042 to 22691966 924 - pseudogene vomeronasal 1 receptor, pseudogene 111
Gm11309 13 22691299 to 22714987 23688 + antisense lncRNA gene predicted gene 11309
Vmn1r207-ps 13 22725684 to 22726622 938 - pseudogene vomeronasal 1 receptor 207, pseudogene
Vmn1r-ps112 13 22733090 to 22733633 543 - pseudogene vomeronasal 1 receptor, pseudogene 112
Vmn1r-ps113 13 22736988 to 22738093 1105 - pseudogene vomeronasal 1 receptor, pseudogene 113
Gm11313 13 22758927 to 22759358 431 + pseudogene predicted gene 11313
Vmn1r208 13 22772399 to 22773325 926 - protein coding gene vomeronasal 1 receptor 208
Gm11314 13 22772656 to 22773471 815 + antisense lncRNA gene predicted gene 11314
Vmn1r209 13 22805580 to 22806518 938 - protein coding gene vomeronasal 1 receptor 209
Vmn1r210 13 22827194 to 22828114 920 - protein coding gene vomeronasal 1 receptor 210
Vmn1r-ps114 13 22844994 to 22846033 1039 - pseudogene vomeronasal 1 receptor, pseudogene 114
Vmn1r211 13 22851599 to 22852495 896 - protein coding gene vomeronasal 1 receptor 211
Vmn1r-ps115 13 22866640 to 22866806 166 + pseudogene vomeronasal 1 receptor, pseudogene 115
Vmn1r-ps116 13 22875105 to 22875308 203 - pseudogene vomeronasal 1 receptor, pseudogene 116
Gm23774 13 22879377 to 22879507 130 - snoRNA gene predicted gene, 23774
Vmn1r212 13 22883042 to 22884205 1163 - protein coding gene vomeronasal 1 receptor 212
Vmn1r-ps117 13 22898386 to 22898705 319 - pseudogene vomeronasal 1 receptor, pseudogene 117
Gm11320 13 22902362 to 22902824 462 - pseudogene predicted gene 11320
Gm11321 13 22931298 to 22932199 901 - pseudogene predicted gene 11321
Vmn1r-ps120 13 22939860 to 22940179 319 - pseudogene vomeronasal 1 receptor, pseudogene 120
Gm11322 13 22943812 to 22944246 434 - pseudogene predicted gene 11322
Gm11318 13 22960872 to 22961773 901 + pseudogene predicted gene 11318
Vmn1r-ps123 13 22996264 to 22996500 236 - pseudogene vomeronasal 1 receptor, pseudogene 123
Vmn1r213 13 23011249 to 23012403 1154 + protein coding gene vomeronasal 1 receptor 213
Vmn1r-ps124 13 23016210 to 23016366 156 - pseudogene vomeronasal 1 receptor, pseudogene 124
Vmn1r-ps125 13 23023251 to 23023540 289 + pseudogene vomeronasal 1 receptor, pseudogene 125
Vmn1r214 13 23034338 to 23035441 1103 + protein coding gene vomeronasal 1 receptor 214
Gm19153 13 23042416 to 23042994 578 - pseudogene predicted gene, 19153
Vmn1r-ps126 13 23056710 to 23057617 907 + pseudogene vomeronasal 1 receptor, pseudogene 126
Vmn1r215 13 23075792 to 23076694 902 + protein coding gene vomeronasal 1 receptor 215
Vmn1r216 13 23099149 to 23100045 896 + protein coding gene vomeronasal 1 receptor 216
Gm11325 13 23103454 to 23103922 468 + pseudogene predicted gene 11325
Vmn1r-ps127 13 23104348 to 23104790 442 + pseudogene vomeronasal 1 receptor, pseudogene 127
Vmn1r217 13 23113834 to 23118088 4254 - protein coding gene vomeronasal 1 receptor 217
Vmn1r-ps128 13 23124505 to 23126243 1738 + pseudogene vomeronasal 1 receptor, pseudogene 128
Vmn1r218 13 23136485 to 23137381 896 + protein coding gene vomeronasal 1 receptor 218
Vmn1r-ps129 13 23153310 to 23153828 518 + pseudogene vomeronasal 1 receptor, pseudogene 129
Vmn1r219 13 23162643 to 23163581 938 + protein coding gene vomeronasal 1 receptor 219
Vmn1r-ps130 13 23166611 to 23167053 442 + pseudogene vomeronasal 1 receptor, pseudogene 130
Vmn1r220 13 23183628 to 23184524 896 - protein coding gene vomeronasal 1 receptor 220
Vmn1r-ps131 13 23198348 to 23198597 249 - pseudogene vomeronasal 1 receptor, pseudogene 131
Vmn1r-ps132 13 23201161 to 23202052 891 - pseudogene vomeronasal 1 receptor, pseudogene 132
Vmn1r221 13 23217373 to 23218311 938 + protein coding gene vomeronasal 1 receptor 221
Vmn1r-ps133 13 23228423 to 23228752 329 - pseudogene vomeronasal 1 receptor, pseudogene 133
Vmn1r222 13 23232115 to 23233041 926 - protein coding gene vomeronasal 1 receptor 222
Vmn1r-ps134 13 23241974 to 23242365 391 - pseudogene vomeronasal 1 receptor, pseudogene 134
Vmn1r223 13 23249238 to 23250323 1085 + protein coding gene vomeronasal 1 receptor 223
Gm33094 13 23251097 to 23259019 7922 - lncRNA gene predicted gene, 33094
Tssr118820 13 23260915 to 23260919 4 + TSS region transcription start site region 118820
Gm11331 13 23266534 to 23266821 287 + pseudogene predicted gene 11331
Vmn1r-ps135 13 23268880 to 23269474 594 + pseudogene vomeronasal 1 receptor, pseudogene 135
Cpgi5344 13 23270326 to 23270774 448 CpG island CpG island 5344
n-TIaat15 13 23270421 to 23270516 95 - tRNA gene nuclear encoded tRNA isoleucine 15 (anticodon TAT)
4930557F10Rik 13 23276204 to 23313400 37196 - lincRNA gene RIKEN cDNA 4930557F10 gene
4933404K08Rik 13 23278350 to 23282267 3917 + lincRNA gene RIKEN cDNA 4933404K08 gene
Gm40832 13 23284323 to 23286746 2423 - lncRNA gene predicted gene, 40832
n-TVaac4 13 23285401 to 23285473 72 + tRNA gene nuclear encoded tRNA valine 4 (anticodon AAC)
n-TAagc10 13 23285649 to 23285721 72 + tRNA gene nuclear encoded tRNA alanine 10 (anticodon AGC)
Cpgi5345 13 23286161 to 23286596 435 CpG island CpG island 5345
Gm11333 13 23298049 to 23298196 147 + pseudogene predicted gene 11333
n-TVaac6 13 23298781 to 23298853 72 + tRNA gene nuclear encoded tRNA valine 6 (anticodon AAC)
n-TAagc11 13 23299061 to 23299133 72 + tRNA gene nuclear encoded tRNA alanine 11 (anticodon AGC)
n-TVcac4 13 23300122 to 23300194 72 + tRNA gene nuclear encoded tRNA valine 4 (anticodon CAC)
n-TVcac11 13 23307629 to 23307701 72 + tRNA gene nuclear encoded tRNA valine 11 (anticodon CAC)
n-TIaat9 13 23309052 to 23309125 73 - tRNA gene nuclear encoded tRNA isoleucine 9 (anticodon AAT)
4930597G05Rik 13 23309430 to 23310168 738 unclassified gene RIKEN cDNA 4930597G05 gene
Cpgi5346 13 23309489 to 23309887 398 CpG island CpG island 5346
Tssr121691 13 23310153 to 23310172 19 - TSS region transcription start site region 121691
Cpgi5347 13 23312918 to 23313774 856 CpG island CpG island 5347
Tssr121692 13 23313354 to 23313361 7 - TSS region transcription start site region 121692
Tssr121693 13 23313387 to 23313399 12 - TSS region transcription start site region 121693
Tssr121694 13 23313400 to 23313414 14 - TSS region transcription start site region 121694
4930586N03Rik 13 23313525 to 23385799 72274 + antisense lncRNA gene RIKEN cDNA 4930586N03 gene
n-TMcat12 13 23317466 to 23317538 72 + tRNA gene nuclear encoded tRNA methionine 12 (anticodon CAT)
Zfp322a 13 23353103 to 23369208 16105 - protein coding gene zinc finger protein 322A
Cpgi5348 13 23368773 to 23369461 688 CpG island CpG island 5348
Tssr121695 13 23368969 to 23369011 42 - TSS region transcription start site region 121695
Tssr121696 13 23369156 to 23369217 61 - TSS region transcription start site region 121696
Gm11334 13 23382505 to 23382660 155 + pseudogene predicted gene 11334
Cpgi5349 13 23395734 to 23396696 962 CpG island CpG island 5349
n-TIaat3 13 23397060 to 23397133 73 + tRNA gene nuclear encoded tRNA isoleucine 3 (anticodon AAT)
n-TAagc12 13 23400795 to 23400867 72 - tRNA gene nuclear encoded tRNA alanine 12 (anticodon AGC)
n-TVaac2 13 23401073 to 23401145 72 - tRNA gene nuclear encoded tRNA valine 2 (anticodon AAC)
n-TVcac2 13 23412077 to 23412149 72 - tRNA gene nuclear encoded tRNA valine 2 (anticodon CAC)
Cpgi5350 13 23412205 to 23412481 276 CpG island CpG island 5350
n-TAagc7 13 23412941 to 23413013 72 - tRNA gene nuclear encoded tRNA alanine 7 (anticodon AGC)
n-TVaac5 13 23413248 to 23413320 72 - tRNA gene nuclear encoded tRNA valine 5 (anticodon AAC)