Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 13:21615763-21816143

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66 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr11 13 21638580 to 21639521 941 - protein coding gene olfactory receptor 11
Olfr1361 13 21658368 to 21664523 6155 - protein coding gene olfactory receptor 1361
Olfr1360 13 21674001 to 21674980 979 - protein coding gene olfactory receptor 1360
Olfr1359 13 21702974 to 21703965 991 + protein coding gene olfactory receptor 1359
n-TGgcc7 13 21710580 to 21710650 70 + tRNA gene nuclear encoded tRNA glycine 7 (anticodon GCC)
n-TMcat7 13 21710994 to 21711065 71 + tRNA gene nuclear encoded tRNA methionine 7 (anticodon CAT)
H2bc13 13 21715763 to 21716143 380 - protein coding gene H2B clustered histone 13
Cpgi5324 13 21716115 to 21716452 337 CpG island CpG island 5324
Tssr121666 13 21716175 to 21716189 14 - TSS region transcription start site region 121666
Tssr118784 13 21716385 to 21716401 16 + TSS region transcription start site region 118784
H2ac13 13 21716422 to 21716814 392 + protein coding gene H2A clustered histone 13
Gm44367 13 21716667 to 21716804 137 - miRNA gene predicted gene, 44367
Cpgi5325 13 21717506 to 21717682 176 CpG island CpG island 5325
Tssr118785 13 21717626 to 21717631 5 + TSS region transcription start site region 118785
H3c10 13 21717659 to 21718069 410 + protein coding gene H3 clustered histone 10
Gm44357 13 21721433 to 21721574 141 + miRNA gene predicted gene, 44357
H2ac14 13 21721457 to 21721808 351 - pseudogene H2A clustered histone 14
Cpgi5326 13 21721764 to 21722537 773 CpG island CpG island 5326
Tssr121667 13 21721795 to 21721811 16 - TSS region transcription start site region 121667
Tssr121668 13 21721815 to 21721867 52 - TSS region transcription start site region 121668
H2bc14 13 21722044 to 21722526 482 + protein coding gene H2B clustered histone 14
Tssr118786 13 21722057 to 21722073 16 + TSS region transcription start site region 118786
Cpgi5327 13 21734955 to 21735595 640 CpG island CpG island 5327
H4c11 13 21735034 to 21735456 422 + protein coding gene H4 clustered histone 11
Tssr118787 13 21735055 to 21735070 15 + TSS region transcription start site region 118787
Tssr121669 13 21746316 to 21746348 32 - TSS region transcription start site region 121669
Cpgi5328 13 21750067 to 21750603 536 CpG island CpG island 5328
H4c12 13 21750194 to 21750505 311 - protein coding gene H4 clustered histone 12
Tssr121670 13 21750535 to 21750543 8 - TSS region transcription start site region 121670
Tssr118788 13 21750747 to 21750753 6 + TSS region transcription start site region 118788
Cpgi5329 13 21753328 to 21754154 826 CpG island CpG island 5329
Tssr118789 13 21753427 to 21753454 27 + TSS region transcription start site region 118789
H2ac15 13 21753435 to 21753827 392 - protein coding gene H2A clustered histone 15
Gm44454 13 21753445 to 21753582 137 + miRNA gene predicted gene, 44454
Tssr121671 13 21753455 to 21753470 15 - TSS region transcription start site region 121671
Tssr121672 13 21753661 to 21753699 38 - TSS region transcription start site region 121672
Tssr121673 13 21753851 to 21753868 17 - TSS region transcription start site region 121673
Tssr118790 13 21754031 to 21754045 14 + TSS region transcription start site region 118790
Tssr118791 13 21754053 to 21754061 8 + TSS region transcription start site region 118791
Tssr118792 13 21754067 to 21754083 16 + TSS region transcription start site region 118792
Tssr118793 13 21754088 to 21754093 5 + TSS region transcription start site region 118793
H2bc15 13 21754123 to 21754503 380 + protein coding gene H2B clustered histone 15
Gm11274 13 21769125 to 21770476 1351 + lncRNA gene predicted gene 11274
Cpgi5330 13 21779255 to 21779538 283 CpG island CpG island 5330
H1f5 13 21779883 to 21780625 742 - protein coding gene H1.5 linker histone, cluster member
Tssr121674 13 21780148 to 21780185 37 - TSS region transcription start site region 121674
Cpgi5331 13 21780238 to 21780750 512 CpG island CpG island 5331
Tssr4006 13 21780445 to 21780456 11 - TSS region transcription start site region 4006
Tssr121675 13 21780616 to 21780632 16 - TSS region transcription start site region 121675
H3c11 13 21782960 to 21783370 410 - protein coding gene H3 clustered histone 11
Tssr121676 13 21783391 to 21783406 15 - TSS region transcription start site region 121676
H2ac22 13 21786826 to 21787218 392 - protein coding gene H2A clustered histone 22
Gm44346 13 21786875 to 21787015 140 + miRNA gene predicted gene, 44346
Cpgi5332 13 21787194 to 21787551 357 CpG island CpG island 5332
Tssr121677 13 21787241 to 21787256 15 - TSS region transcription start site region 121677
H2bc22 13 21787461 to 21789213 1752 + protein coding gene H2B clustered histone 22
Tssr118794 13 21787480 to 21787494 14 + TSS region transcription start site region 118794
n-Tsta1 13 21795799 to 21795881 82 + tRNA gene nuclear encoded tRNA suppressor ta1 (anticodon TTA)
H2bc23 13 21806612 to 21810197 3585 - protein coding gene H2B clustered histone 23
Tssr121678 13 21810190 to 21810200 10 - TSS region transcription start site region 121678
Tssr118795 13 21810428 to 21810442 14 + TSS region transcription start site region 118795
H2ac23 13 21810465 to 21810944 479 + protein coding gene H2A clustered histone 23
Gm19658 13 21810712 to 21810849 137 - miRNA gene predicted gene, 19658
Tssr118796 13 21811737 to 21811754 17 + TSS region transcription start site region 118796
H4c17 13 21811746 to 21812147 401 + protein coding gene H4 clustered histone 17
Tssr118797 13 21811760 to 21811766 6 + TSS region transcription start site region 118797