Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:20937349-21208299

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aoah 13 20794113 to 21036617 242504 + protein coding gene acyloxyacyl hydrolase
Gm32242 13 20936803 to 21010596 73793 - lncRNA gene predicted gene, 32242
Tssr118720 13 20945046 to 20945050 4 + TSS region transcription start site region 118720
Tssr118721 13 20956713 to 20956727 14 + TSS region transcription start site region 118721
Tssr118722 13 20959578 to 20959593 15 + TSS region transcription start site region 118722
Tssr118723 13 20959676 to 20959684 8 + TSS region transcription start site region 118723
Tssr118724 13 20963883 to 20963901 18 + TSS region transcription start site region 118724
Tssr118725 13 20964091 to 20964102 11 + TSS region transcription start site region 118725
Tssr118726 13 20964547 to 20964551 4 + TSS region transcription start site region 118726
Tssr118727 13 20966662 to 20966678 16 + TSS region transcription start site region 118727
Tssr121619 13 20976280 to 20976282 2 - TSS region transcription start site region 121619
Tssr118728 13 20978045 to 20978048 3 + TSS region transcription start site region 118728
Tssr118729 13 20985135 to 20985146 11 + TSS region transcription start site region 118729
Tssr118730 13 20986162 to 20986177 15 + TSS region transcription start site region 118730
Tssr118731 13 20986204 to 20986213 9 + TSS region transcription start site region 118731
Tssr118732 13 20986223 to 20986235 12 + TSS region transcription start site region 118732
Tssr118733 13 20986294 to 20986306 12 + TSS region transcription start site region 118733
Tssr118734 13 20986331 to 20986352 21 + TSS region transcription start site region 118734
Tssr118735 13 20986395 to 20986410 15 + TSS region transcription start site region 118735
Tssr118736 13 20986417 to 20986462 45 + TSS region transcription start site region 118736
Tssr118737 13 20993370 to 20993374 4 + TSS region transcription start site region 118737
Tssr118738 13 20999959 to 21000005 46 + TSS region transcription start site region 118738
Tssr118739 13 21001724 to 21001741 17 + TSS region transcription start site region 118739
Tssr118740 13 21002708 to 21002721 13 + TSS region transcription start site region 118740
Tssr118741 13 21003458 to 21003462 4 + TSS region transcription start site region 118741
Tssr118742 13 21008580 to 21008594 14 + TSS region transcription start site region 118742
Tssr118743 13 21023941 to 21023983 42 + TSS region transcription start site region 118743
Tssr118744 13 21041198 to 21041235 37 + TSS region transcription start site region 118744
Olfr1370 13 21072349 to 21073299 950 - protein coding gene olfactory receptor 1370
Olfr1369-ps1 13 21115594 to 21116701 1107 + pseudogene olfactory receptor 1369, pseudogene 1
Olfr263 13 21132777 to 21133730 953 + protein coding gene olfactory receptor 263
Olfr1368 13 21142111 to 21143055 944 - protein coding gene olfactory receptor 1368
n-TEctc11 13 21160785 to 21160856 71 - tRNA gene nuclear encoded tRNA glutamic acid 11 (anticodon CTC)
n-TFgaa4 13 21161405 to 21161477 72 + tRNA gene nuclear encoded tRNA pheylalanine 4 (anticodon GAA)
Tssr118745 13 21166178 to 21166183 5 + TSS region transcription start site region 118745
Gm32298 13 21166337 to 21170774 4437 + lncRNA gene predicted gene, 32298
n-TMcat14 13 21167604 to 21167676 72 + tRNA gene nuclear encoded tRNA methionine 14 (anticodon CAT)
n-TKctt28 13 21168075 to 21168147 72 - tRNA gene nuclear encoded tRNA lysine 28 (anticodon TTT)
n-TMcat15 13 21169687 to 21169759 72 - tRNA gene nuclear encoded tRNA methionine 15 (anticodon CAT)
Cpgi5310 13 21169773 to 21170051 278 CpG island CpG island 5310
n-TLaag7 13 21170036 to 21170117 81 + tRNA gene nuclear encoded tRNA leucine 7 (anticodon AAG)
n-TLaag5 13 21170206 to 21170287 81 + tRNA gene nuclear encoded tRNA leucine 5 (anticodon AAG)
Cpgi5311 13 21171176 to 21171426 250 CpG island CpG island 5311
n-TQctg7 13 21172351 to 21172422 71 + tRNA gene nuclear encoded tRNA glutamine 7 (anticodon CTG)
n-TLcaa4 13 21172837 to 21172942 105 - tRNA gene nuclear encoded tRNA leucine 4 (anticodon CAA)
Gm47806 13 21177187 to 21187556 10369 - antisense lncRNA gene predicted gene, 47806
Tssr118746 13 21179424 to 21179427 3 + TSS region transcription start site region 118746
Tssr118747 13 21179433 to 21179440 7 + TSS region transcription start site region 118747
Tssr118748 13 21179450 to 21179462 12 + TSS region transcription start site region 118748
Trim27 13 21179450 to 21194723 15273 + protein coding gene tripartite motif-containing 27
Tssr118749 13 21179467 to 21179481 14 + TSS region transcription start site region 118749
Cpgi5312 13 21179606 to 21181311 1705 CpG island CpG island 5312
Tssr118750 13 21179899 to 21179942 43 + TSS region transcription start site region 118750
Tssr118751 13 21179950 to 21179966 16 + TSS region transcription start site region 118751
Tssr118752 13 21179983 to 21179992 9 + TSS region transcription start site region 118752
Tssr118753 13 21180162 to 21180176 14 + TSS region transcription start site region 118753
Tssr118754 13 21180179 to 21180245 66 + TSS region transcription start site region 118754
Tssr118755 13 21180390 to 21180460 70 + TSS region transcription start site region 118755
Tssr118756 13 21180549 to 21180604 55 + TSS region transcription start site region 118756
Tssr118757 13 21180950 to 21180953 3 + TSS region transcription start site region 118757
Tssr118758 13 21181159 to 21181168 9 + TSS region transcription start site region 118758
Tssr118759 13 21183763 to 21183784 21 + TSS region transcription start site region 118759
Tssr118760 13 21183862 to 21183874 12 + TSS region transcription start site region 118760
n-TLcaa1 13 21200204 to 21200308 104 + tRNA gene nuclear encoded tRNA leucine 1 (anticodon CAA)
Cpgi5313 13 21200375 to 21200825 450 CpG island CpG island 5313