Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:19549099-21309109

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336 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epdr1 13 19591706 to 19619927 28221 - protein coding gene ependymin related protein 1 (zebrafish)
Cpgi5305 13 19619194 to 19619854 660 CpG island CpG island 5305
Tssr121605 13 19619758 to 19619811 53 - TSS region transcription start site region 121605
Tssr121606 13 19619820 to 19619827 7 - TSS region transcription start site region 121606
Cpgi5306 13 19622968 to 19623850 882 CpG island CpG island 5306
Tssr118566 13 19623163 to 19623183 20 + TSS region transcription start site region 118566
Sfrp4 13 19623175 to 19632825 9650 + protein coding gene secreted frizzled-related protein 4
Tssr118567 13 19623300 to 19623313 13 + TSS region transcription start site region 118567
Tssr118568 13 19623333 to 19623340 7 + TSS region transcription start site region 118568
D13Mit218 13 19629518 to 19629692 174 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 218
Nme8 13 19645078 to 19697794 52716 - protein coding gene NME/NM23 family member 8
Gm47606 13 19672382 to 19673934 1552 - unclassified gene predicted gene, 47606
Tssr121607 13 19697733 to 19697771 38 - TSS region transcription start site region 121607
Gpr141b 13 19727426 to 19732951 5525 - protein coding gene G protein-coupled receptor 141B
Tssr121608 13 19732730 to 19732755 25 - TSS region transcription start site region 121608
Tssr121609 13 19732800 to 19732815 15 - TSS region transcription start site region 121609
Tssr121610 13 19732929 to 19732954 25 - TSS region transcription start site region 121610
Gpr141 13 19749682 to 19824257 74575 - protein coding gene G protein-coupled receptor 141
Tssr121611 13 19774202 to 19774206 4 - TSS region transcription start site region 121611
Gm19154 13 19820778 to 19821654 876 + pseudogene predicted gene, 19154
Tssr121612 13 19824234 to 19824268 34 - TSS region transcription start site region 121612
Tssr121613 13 19927914 to 19927921 7 - TSS region transcription start site region 121613
Gm5446 13 19995021 to 19995804 783 - pseudogene predicted gene 5446
Cpgi5307 13 19995733 to 19995922 189 CpG island CpG island 5307
Tssr121614 13 20016502 to 20016506 4 - TSS region transcription start site region 121614
Cpgi5308 13 20090160 to 20091835 1675 CpG island CpG island 5308
Tssr118569 13 20090257 to 20090285 28 + TSS region transcription start site region 118569
Tssr118570 13 20090296 to 20090310 14 + TSS region transcription start site region 118570
Tssr118571 13 20090452 to 20090493 41 + TSS region transcription start site region 118571
Tssr118572 13 20090500 to 20090518 18 + TSS region transcription start site region 118572
Tssr118573 13 20090538 to 20090633 95 + TSS region transcription start site region 118573
Elmo1 13 20090596 to 20608353 517757 + protein coding gene engulfment and cell motility 1
Tssr118574 13 20090635 to 20090642 7 + TSS region transcription start site region 118574
Tssr118575 13 20090644 to 20090655 11 + TSS region transcription start site region 118575
Tssr118576 13 20090664 to 20090679 15 + TSS region transcription start site region 118576
Tssr121615 13 20091197 to 20091208 11 - TSS region transcription start site region 121615
Tssr121616 13 20091520 to 20091527 7 - TSS region transcription start site region 121616
Tssr118577 13 20096011 to 20096037 26 + TSS region transcription start site region 118577
Tssr118578 13 20098186 to 20098189 3 + TSS region transcription start site region 118578
Tssr118579 13 20111504 to 20111515 11 + TSS region transcription start site region 118579
Tssr118580 13 20184940 to 20184989 49 + TSS region transcription start site region 118580
Tssr118581 13 20184998 to 20185011 13 + TSS region transcription start site region 118581
Cpgi5309 13 20185250 to 20185516 266 CpG island CpG island 5309
Tssr118582 13 20185287 to 20185301 14 + TSS region transcription start site region 118582
Tssr118583 13 20185322 to 20185364 42 + TSS region transcription start site region 118583
Tssr118584 13 20185403 to 20185410 7 + TSS region transcription start site region 118584
Tssr118585 13 20185416 to 20185427 11 + TSS region transcription start site region 118585
Tssr118586 13 20204424 to 20204434 10 + TSS region transcription start site region 118586
Tssr121617 13 20228436 to 20228440 4 - TSS region transcription start site region 121617
Tssr118587 13 20240806 to 20240814 8 + TSS region transcription start site region 118587
D13Dcr5 13 20255418 to 20255513 95 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 5
Gm47665 13 20271905 to 20274039 2134 + unclassified gene predicted gene, 47665
Sysbp2 13 20293442 to 59673791 39380349 QTL systolic blood pressure 2
Heal23 13 20293442 to 20293650 208 QTL wound healing/regeneration 23
Heal24 13 20293442 to 20293650 208 QTL wound healing/regeneration
D13Mit16 13 20293442 to 20293650 208 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 16
Bmd3 13 20293442 to 20293650 208 QTL bone mineral density 3
Tssr118588 13 20352937 to 20352942 5 + TSS region transcription start site region 118588
Tssr118589 13 20406342 to 20406358 16 + TSS region transcription start site region 118589
D13Ertd212e 13 20417520 to 20417734 214 DNA segment DNA segment, Chr 13, ERATO Doi 212, expressed
Tssr118590 13 20429059 to 20429071 12 + TSS region transcription start site region 118590
Tssr118591 13 20429099 to 20429109 10 + TSS region transcription start site region 118591
D13Dcr1 13 20431332 to 20431458 126 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 1
D13Mit3 13 20431342 to 20431502 160 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 3
Tesq1 13 20431342 to 55572704 35141362 QTL testis weight QTL 1
Twq1 13 20431342 to 20431502 160 QTL testis weight QTL 1
Pregq3 13 20431342 to 72237070 51805728 QTL pregnancy QTL 3
Tssr118592 13 20445284 to 20445289 5 + TSS region transcription start site region 118592
Gm32036 13 20445286 to 20473490 28204 - antisense lncRNA gene predicted gene, 32036
Tssr118593 13 20470115 to 20470120 5 + TSS region transcription start site region 118593
Tssr118594 13 20472690 to 20472736 46 + TSS region transcription start site region 118594
Tssr118595 13 20473064 to 20473089 25 + TSS region transcription start site region 118595
Tssr118596 13 20473094 to 20473109 15 + TSS region transcription start site region 118596
Tssr118597 13 20477499 to 20477510 11 + TSS region transcription start site region 118597
Tssr118598 13 20477602 to 20477662 60 + TSS region transcription start site region 118598
D13Mit115 13 20496030 to 20496173 143 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 115
Heal3 13 20496030 to 20496173 143 QTL wound healing/regeneration 3
Gm47664 13 20499888 to 20501227 1339 + sense intronic lncRNA gene predicted gene, 47664
Gm47657 13 20504795 to 20506598 1803 + unclassified gene predicted gene, 47657
Tssr118599 13 20605394 to 20605414 20 + TSS region transcription start site region 118599
Tssr118600 13 20605437 to 20605461 24 + TSS region transcription start site region 118600
Gm47721 13 20645757 to 20647164 1407 + pseudogene predicted gene, 47721
Tssr4005 13 20660578 to 20660582 4 - TSS region transcription start site region 4005
Gm7611 13 20704383 to 20705382 999 - pseudogene predicted gene 7611
Tssr118601 13 20748347 to 20748348 1 + TSS region transcription start site region 118601
Gm7614 13 20748498 to 20748825 327 + pseudogene predicted gene 7614
Aoah 13 20794113 to 21036617 242504 + protein coding gene acyloxyacyl hydrolase
Tssr118602 13 20794128 to 20794179 51 + TSS region transcription start site region 118602
Tssr118603 13 20794187 to 20794204 17 + TSS region transcription start site region 118603
Tssr118604 13 20794212 to 20794223 11 + TSS region transcription start site region 118604
Tssr118605 13 20794298 to 20794307 9 + TSS region transcription start site region 118605
Tssr118606 13 20794312 to 20794364 52 + TSS region transcription start site region 118606
Tssr118607 13 20794445 to 20794452 7 + TSS region transcription start site region 118607
Tssr118608 13 20794920 to 20794942 22 + TSS region transcription start site region 118608
Tssr118609 13 20796389 to 20796391 2 + TSS region transcription start site region 118609
Tssr118610 13 20796418 to 20796467 49 + TSS region transcription start site region 118610
Tssr118611 13 20796509 to 20796526 17 + TSS region transcription start site region 118611
Tssr118612 13 20797670 to 20797684 14 + TSS region transcription start site region 118612
Tssr118613 13 20799092 to 20799104 12 + TSS region transcription start site region 118613
Tssr118614 13 20800038 to 20800064 26 + TSS region transcription start site region 118614
Tssr118615 13 20801165 to 20801177 12 + TSS region transcription start site region 118615
Tssr118616 13 20801612 to 20801620 8 + TSS region transcription start site region 118616
Tssr118617 13 20801880 to 20801912 32 + TSS region transcription start site region 118617
Tssr118618 13 20803113 to 20803132 19 + TSS region transcription start site region 118618
Tssr118619 13 20805170 to 20805180 10 + TSS region transcription start site region 118619
Tssr118620 13 20805181 to 20805190 9 + TSS region transcription start site region 118620
Tssr118621 13 20813928 to 20813934 6 + TSS region transcription start site region 118621
Tssr118622 13 20817785 to 20817821 36 + TSS region transcription start site region 118622
Tssr118623 13 20818333 to 20818354 21 + TSS region transcription start site region 118623
Tssr118624 13 20818819 to 20818845 26 + TSS region transcription start site region 118624
Tssr118625 13 20818868 to 20818877 9 + TSS region transcription start site region 118625
Tssr118626 13 20824145 to 20824175 30 + TSS region transcription start site region 118626
Tssr118627 13 20824684 to 20824726 42 + TSS region transcription start site region 118627
Tssr118628 13 20825270 to 20825274 4 + TSS region transcription start site region 118628
Tssr118629 13 20825832 to 20825848 16 + TSS region transcription start site region 118629
Tssr118630 13 20826126 to 20826144 18 + TSS region transcription start site region 118630
Tssr118631 13 20826484 to 20826501 17 + TSS region transcription start site region 118631
Tssr118632 13 20826508 to 20826520 12 + TSS region transcription start site region 118632
Tssr118633 13 20827664 to 20827700 36 + TSS region transcription start site region 118633
Gm47727 13 20827836 to 20828316 480 + pseudogene predicted gene, 47727
Tssr118634 13 20829354 to 20829367 13 + TSS region transcription start site region 118634
Tssr118635 13 20829534 to 20829555 21 + TSS region transcription start site region 118635
Tssr118636 13 20831105 to 20831116 11 + TSS region transcription start site region 118636
Tssr118637 13 20831124 to 20831134 10 + TSS region transcription start site region 118637
Tssr118638 13 20835684 to 20835695 11 + TSS region transcription start site region 118638
Tssr118639 13 20835903 to 20835907 4 + TSS region transcription start site region 118639
Tssr118640 13 20835961 to 20835966 5 + TSS region transcription start site region 118640
Tssr118641 13 20836044 to 20836049 5 + TSS region transcription start site region 118641
Tssr118642 13 20836071 to 20836086 15 + TSS region transcription start site region 118642
Tssr118643 13 20836108 to 20836113 5 + TSS region transcription start site region 118643
Tssr118644 13 20836121 to 20836132 11 + TSS region transcription start site region 118644
Tssr118645 13 20836164 to 20836167 3 + TSS region transcription start site region 118645
Tssr118646 13 20836199 to 20836210 11 + TSS region transcription start site region 118646
Tssr118647 13 20836213 to 20836240 27 + TSS region transcription start site region 118647
Tssr118648 13 20837218 to 20837240 22 + TSS region transcription start site region 118648
Tssr118649 13 20840861 to 20840897 36 + TSS region transcription start site region 118649
Tssr118650 13 20840958 to 20840969 11 + TSS region transcription start site region 118650
Tssr118651 13 20842036 to 20842048 12 + TSS region transcription start site region 118651
Tssr118652 13 20842218 to 20842225 7 + TSS region transcription start site region 118652
Tssr118653 13 20842230 to 20842251 21 + TSS region transcription start site region 118653
Tssr118654 13 20842319 to 20842331 12 + TSS region transcription start site region 118654
Gm25605 13 20844754 to 20844877 123 + snRNA gene predicted gene, 25605
Tssr118655 13 20846032 to 20846036 4 + TSS region transcription start site region 118655
Tssr118656 13 20846764 to 20846774 10 + TSS region transcription start site region 118656
Tssr118657 13 20847263 to 20847272 9 + TSS region transcription start site region 118657
Tssr118658 13 20847712 to 20847726 14 + TSS region transcription start site region 118658
Tssr118659 13 20847831 to 20847850 19 + TSS region transcription start site region 118659
Tssr118660 13 20849517 to 20849527 10 + TSS region transcription start site region 118660
Tssr118661 13 20849712 to 20849723 11 + TSS region transcription start site region 118661
Tssr118662 13 20849994 to 20850041 47 + TSS region transcription start site region 118662
Tssr118663 13 20851389 to 20851401 12 + TSS region transcription start site region 118663
Tssr118664 13 20852727 to 20852741 14 + TSS region transcription start site region 118664
Tssr118665 13 20852789 to 20852800 11 + TSS region transcription start site region 118665
Tssr118666 13 20853627 to 20853638 11 + TSS region transcription start site region 118666
Tssr118667 13 20853832 to 20853861 29 + TSS region transcription start site region 118667
Tssr118668 13 20853875 to 20853890 15 + TSS region transcription start site region 118668
Tssr118669 13 20853897 to 20853917 20 + TSS region transcription start site region 118669
Tssr118670 13 20853919 to 20853946 27 + TSS region transcription start site region 118670
Tssr118671 13 20854054 to 20854063 9 + TSS region transcription start site region 118671
Tssr118672 13 20854809 to 20854821 12 + TSS region transcription start site region 118672
Tssr118673 13 20855694 to 20855705 11 + TSS region transcription start site region 118673
Tssr118674 13 20855828 to 20855837 9 + TSS region transcription start site region 118674
Tssr118675 13 20857308 to 20857321 13 + TSS region transcription start site region 118675
Tssr118676 13 20857772 to 20857786 14 + TSS region transcription start site region 118676
Tssr118677 13 20858342 to 20858360 18 + TSS region transcription start site region 118677
Tssr118678 13 20859253 to 20859263 10 + TSS region transcription start site region 118678
Tssr118679 13 20859586 to 20859598 12 + TSS region transcription start site region 118679
Tssr118680 13 20859683 to 20859692 9 + TSS region transcription start site region 118680
Tssr118681 13 20860612 to 20860621 9 + TSS region transcription start site region 118681
Tssr118682 13 20860630 to 20860641 11 + TSS region transcription start site region 118682
Tssr118683 13 20884097 to 20884103 6 + TSS region transcription start site region 118683
Tssr118684 13 20885072 to 20885083 11 + TSS region transcription start site region 118684
Tssr118685 13 20885108 to 20885136 28 + TSS region transcription start site region 118685
Tssr118686 13 20885142 to 20885152 10 + TSS region transcription start site region 118686
Tssr118687 13 20885211 to 20885262 51 + TSS region transcription start site region 118687
Tssr118688 13 20885282 to 20885292 10 + TSS region transcription start site region 118688
Tssr118689 13 20885298 to 20885351 53 + TSS region transcription start site region 118689
Tssr118690 13 20885357 to 20885367 10 + TSS region transcription start site region 118690
Tssr121618 13 20885901 to 20885912 11 - TSS region transcription start site region 121618
Tssr118691 13 20886513 to 20886530 17 + TSS region transcription start site region 118691
Tssr118692 13 20895554 to 20895576 22 + TSS region transcription start site region 118692
Tssr118693 13 20896508 to 20896518 10 + TSS region transcription start site region 118693
Tssr118694 13 20897628 to 20897649 21 + TSS region transcription start site region 118694
Tssr118695 13 20899245 to 20899262 17 + TSS region transcription start site region 118695
Tssr118696 13 20899602 to 20899624 22 + TSS region transcription start site region 118696
Tssr118697 13 20899638 to 20899663 25 + TSS region transcription start site region 118697
Tssr118698 13 20902890 to 20902901 11 + TSS region transcription start site region 118698
Tssr118699 13 20902916 to 20902944 28 + TSS region transcription start site region 118699
Tssr118700 13 20902970 to 20902983 13 + TSS region transcription start site region 118700
Tssr118701 13 20903009 to 20903029 20 + TSS region transcription start site region 118701
Tssr118702 13 20903049 to 20903060 11 + TSS region transcription start site region 118702
Tssr118703 13 20908549 to 20908550 1 + TSS region transcription start site region 118703
Tssr118704 13 20910660 to 20910672 12 + TSS region transcription start site region 118704
Tssr118705 13 20917659 to 20917676 17 + TSS region transcription start site region 118705
Tssr118706 13 20922939 to 20922951 12 + TSS region transcription start site region 118706
Tssr118707 13 20922990 to 20923012 22 + TSS region transcription start site region 118707
Tssr118708 13 20923069 to 20923080 11 + TSS region transcription start site region 118708
Tssr118709 13 20923108 to 20923119 11 + TSS region transcription start site region 118709
Tssr118710 13 20923142 to 20923161 19 + TSS region transcription start site region 118710
Tssr118711 13 20923167 to 20923178 11 + TSS region transcription start site region 118711