Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:19226528-19486551

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103 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tcrg 13 19178042 to 19356476 178434 + complex/cluster/region T cell receptor gamma chain
Tcrg-V3 13 19242845 to 19243301 456 + gene segment T cell receptor gamma, variable 3
Tssr118528 13 19255556 to 19255579 23 + TSS region transcription start site region 118528
Tssr118529 13 19256862 to 19256909 47 + TSS region transcription start site region 118529
Tssr118530 13 19256988 to 19257004 16 + TSS region transcription start site region 118530
Tssr118531 13 19257103 to 19257107 4 + TSS region transcription start site region 118531
Trgj3 13 19257117 to 19257176 59 + gene segment T cell receptor gamma joining 3
Tcrg-C3 13 19260885 to 19263397 2512 + gene segment T cell receptor gamma, constant 3
Tssr121559 13 19304378 to 19304389 11 - TSS region transcription start site region 121559
Tssr121560 13 19304437 to 19304451 14 - TSS region transcription start site region 121560
Tssr121561 13 19304988 to 19304993 5 - TSS region transcription start site region 121561
Tcrg-C2 13 19305060 to 19307551 2491 - gene segment T-cell receptor gamma, constant 2
Tssr118532 13 19305123 to 19305173 50 + TSS region transcription start site region 118532
Tssr121562 13 19306161 to 19306183 22 - TSS region transcription start site region 121562
Tssr121563 13 19306302 to 19306316 14 - TSS region transcription start site region 121563
Tssr121564 13 19307368 to 19307376 8 - TSS region transcription start site region 121564
Tssr121565 13 19307860 to 19307891 31 - TSS region transcription start site region 121565
Tssr121566 13 19308034 to 19308039 5 - TSS region transcription start site region 121566
Tssr121567 13 19308521 to 19308534 13 - TSS region transcription start site region 121567
Tssr121568 13 19308552 to 19308563 11 - TSS region transcription start site region 121568
Trgj2 13 19311245 to 19311304 59 - gene segment T cell receptor gamma joining 2
Tssr121569 13 19311285 to 19311292 7 - TSS region transcription start site region 121569
Tssr121570 13 19311308 to 19311326 18 - TSS region transcription start site region 121570
Tssr121571 13 19311363 to 19311372 9 - TSS region transcription start site region 121571
Tssr121572 13 19311424 to 19311435 11 - TSS region transcription start site region 121572
Tssr121573 13 19311447 to 19311456 9 - TSS region transcription start site region 121573
Tssr121574 13 19311466 to 19311475 9 - TSS region transcription start site region 121574
Tssr121575 13 19311481 to 19311498 17 - TSS region transcription start site region 121575
Tssr121576 13 19311551 to 19311566 15 - TSS region transcription start site region 121576
Tssr121577 13 19311682 to 19311715 33 - TSS region transcription start site region 121577
Tssr118533 13 19336560 to 19336570 10 + TSS region transcription start site region 118533
Trgv2 13 19336573 to 19337026 453 - gene segment T cell receptor gamma variable 2
Tssr121578 13 19336825 to 19336831 6 - TSS region transcription start site region 121578
Tssr121579 13 19337035 to 19337044 9 - TSS region transcription start site region 121579
Tssr121580 13 19337047 to 19337075 28 - TSS region transcription start site region 121580
Tssr121581 13 19337126 to 19337133 7 - TSS region transcription start site region 121581
Tssr121582 13 19337179 to 19337190 11 - TSS region transcription start site region 121582
Tssr4004 13 19337250 to 19337271 21 + TSS region transcription start site region 4004
Tssr121583 13 19337286 to 19337296 10 - TSS region transcription start site region 121583
Tssr121584 13 19337327 to 19337336 9 - TSS region transcription start site region 121584
Tssr121585 13 19338744 to 19338755 11 - TSS region transcription start site region 121585
Tssr121586 13 19338763 to 19338775 12 - TSS region transcription start site region 121586
Tssr121587 13 19338781 to 19338795 14 - TSS region transcription start site region 121587
Tssr118534 13 19339816 to 19339829 13 + TSS region transcription start site region 118534
Tssr118535 13 19339846 to 19339863 17 + TSS region transcription start site region 118535
Tssr118536 13 19339867 to 19339876 9 + TSS region transcription start site region 118536
Tssr118537 13 19339970 to 19339981 11 + TSS region transcription start site region 118537
Tcrg-V1 13 19340016 to 19340454 438 + gene segment T cell receptor gamma, variable 1
Tssr118538 13 19340547 to 19340578 31 + TSS region transcription start site region 118538
Tssr118539 13 19341692 to 19341698 6 + TSS region transcription start site region 118539
Tssr121588 13 19341702 to 19341709 7 - TSS region transcription start site region 121588
Tssr118540 13 19341765 to 19341771 6 + TSS region transcription start site region 118540
Tssr118541 13 19341816 to 19341827 11 + TSS region transcription start site region 118541
Tssr118542 13 19341880 to 19341905 25 + TSS region transcription start site region 118542
Tssr118543 13 19341928 to 19341941 13 + TSS region transcription start site region 118543
Tssr118544 13 19341943 to 19341961 18 + TSS region transcription start site region 118544
Tssr118545 13 19341965 to 19341987 22 + TSS region transcription start site region 118545
Tssr118546 13 19342058 to 19342069 11 + TSS region transcription start site region 118546
Tssr118547 13 19342081 to 19342142 61 + TSS region transcription start site region 118547
Trgj4 13 19342152 to 19342212 60 + gene segment T cell receptor gamma joining 4
Tssr118548 13 19342154 to 19342161 7 + TSS region transcription start site region 118548
Tssr118549 13 19342727 to 19342739 12 + TSS region transcription start site region 118549
Tssr121589 13 19343258 to 19343266 8 - TSS region transcription start site region 121589
Tssr118550 13 19343442 to 19343459 17 + TSS region transcription start site region 118550
Tssr118551 13 19344200 to 19344233 33 + TSS region transcription start site region 118551
Tssr121590 13 19344324 to 19344348 24 - TSS region transcription start site region 121590
Tcrg-C4 13 19344558 to 19352343 7785 + gene segment T cell receptor gamma, constant 4
Tssr121591 13 19345189 to 19345231 42 - TSS region transcription start site region 121591
Tssr121592 13 19345769 to 19345799 30 - TSS region transcription start site region 121592
Tssr118552 13 19345956 to 19345967 11 + TSS region transcription start site region 118552
Tssr118553 13 19347086 to 19347090 4 + TSS region transcription start site region 118553
Tssr118554 13 19347538 to 19347554 16 + TSS region transcription start site region 118554
Tssr118555 13 19349035 to 19349050 15 + TSS region transcription start site region 118555
Tssr118556 13 19350300 to 19350328 28 + TSS region transcription start site region 118556
Tssr118557 13 19352348 to 19352366 18 + TSS region transcription start site region 118557
Tssr118558 13 19352406 to 19352422 16 + TSS region transcription start site region 118558
Tssr121593 13 19356176 to 19356182 6 - TSS region transcription start site region 121593
Tssr121594 13 19356280 to 19356305 25 - TSS region transcription start site region 121594
Tssr118559 13 19356528 to 19356551 23 + TSS region transcription start site region 118559
Tssr121595 13 19357300 to 19357311 11 - TSS region transcription start site region 121595
Tssr121596 13 19357343 to 19357399 56 - TSS region transcription start site region 121596
Tssr118560 13 19357521 to 19357540 19 + TSS region transcription start site region 118560
Stard3nl 13 19357676 to 19395795 38119 - protein coding gene STARD3 N-terminal like
Tssr121597 13 19357939 to 19357955 16 - TSS region transcription start site region 121597
Tssr118561 13 19358042 to 19358053 11 + TSS region transcription start site region 118561
Tssr118562 13 19358055 to 19358071 16 + TSS region transcription start site region 118562
Tssr121598 13 19358137 to 19358148 11 - TSS region transcription start site region 121598
Tssr121599 13 19358279 to 19358298 19 - TSS region transcription start site region 121599
Tssr121600 13 19358318 to 19358367 49 - TSS region transcription start site region 121600
Tssr118563 13 19358496 to 19358504 8 + TSS region transcription start site region 118563
Tssr121601 13 19358567 to 19358572 5 - TSS region transcription start site region 121601
Tssr121602 13 19358612 to 19358624 12 - TSS region transcription start site region 121602
D13Mit153 13 19381938 to 19382137 199 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 153
Tssr118564 13 19382611 to 19382617 6 + TSS region transcription start site region 118564
Gm42683 13 19393126 to 19395453 2327 - unclassified gene predicted gene 42683
Cpgi5304 13 19395316 to 19395972 656 CpG island CpG island 5304
Tssr121603 13 19395728 to 19395789 61 - TSS region transcription start site region 121603
Tssr121604 13 19395794 to 19395795 1 - TSS region transcription start site region 121604
Tssr118565 13 19395997 to 19396010 13 + TSS region transcription start site region 118565
Gm40827 13 19403876 to 19425573 21697 + lncRNA gene predicted gene, 40827
Gm18131 13 19412800 to 19413248 448 + pseudogene predicted gene, 18131
D13Mit219 13 19425510 to 19425778 268 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 219
9330199G10Rik 13 19462847 to 19504367 41520 - lincRNA gene RIKEN cDNA 9330199G10 gene