Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:18497141-19187163

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm48829 13 18640257 to 18645349 5092 - lincRNA gene predicted gene, 48829
Tssr118499 13 18717289 to 18717316 27 + TSS region transcription start site region 118499
Vps41 13 18717292 to 18866811 149519 + protein coding gene VPS41 HOPS complex subunit
Cpgi5302 13 18717293 to 18717524 231 CpG island CpG island 5302
Tssr118500 13 18717680 to 18717687 7 + TSS region transcription start site region 118500
Tssr4003 13 18745098 to 18745112 14 + TSS region transcription start site region 4003
Tssr118501 13 18781417 to 18781435 18 + TSS region transcription start site region 118501
Tssr118502 13 18842141 to 18842163 22 + TSS region transcription start site region 118502
Gm26172 13 18922577 to 18922710 133 + snoRNA gene predicted gene, 26172
Cpgi5303 13 18947982 to 18949060 1078 CpG island CpG island 5303
Amph 13 18948205 to 19150921 202716 + protein coding gene amphiphysin
Tssr118503 13 18948344 to 18948417 73 + TSS region transcription start site region 118503
Tssr118504 13 18957932 to 18957942 10 + TSS region transcription start site region 118504
Gm47658 13 18971702 to 18974997 3295 - antisense lncRNA gene predicted gene, 47658
Gm47659 13 18973460 to 18974141 681 + pseudogene predicted gene, 47659
Gm18065 13 18983930 to 18984455 525 + pseudogene predicted gene, 18065
Gm47661 13 19029940 to 19057896 27956 - antisense lncRNA gene predicted gene, 47661
Gm47660 13 19071197 to 19071575 378 - pseudogene predicted gene, 47660
Gm31887 13 19162036 to 19193558 31522 - antisense lncRNA gene predicted gene, 31887
Tssr118505 13 19177905 to 19177930 25 + TSS region transcription start site region 118505
Tcrg 13 19178042 to 19356476 178434 + complex/cluster/region T cell receptor gamma chain
Tcrg-V7 13 19178042 to 19178492 450 + gene segment T cell receptor gamma, variable 7
Tssr121545 13 19182356 to 19182369 13 - TSS region transcription start site region 121545
Tssr118506 13 19184927 to 19184981 54 + TSS region transcription start site region 118506
Tcrg-V4 13 19184981 to 19185506 525 + gene segment T cell receptor gamma, variable 4
Tssr118507 13 19184986 to 19184998 12 + TSS region transcription start site region 118507
Tssr118508 13 19185005 to 19185022 17 + TSS region transcription start site region 118508
Tssr118509 13 19185037 to 19185048 11 + TSS region transcription start site region 118509
Tssr118510 13 19185095 to 19185106 11 + TSS region transcription start site region 118510
Tssr121546 13 19185506 to 19185518 12 - TSS region transcription start site region 121546