Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:16646726-17446726

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr118484 13 16756178 to 16756182 4 + TSS region transcription start site region 118484
D13Mit305 13 16779372 to 16779487 115 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 305
Sugct 13 16857472 to 17694795 837323 - protein coding gene succinyl-CoA glutarate-CoA transferase
Gm26098 13 16859185 to 16859472 287 - unclassified non-coding RNA gene predicted gene, 26098
Tssr4001 13 16910931 to 16910932 1 + TSS region transcription start site region 4001
Gm48503 13 16937609 to 16947045 9436 + antisense lncRNA gene predicted gene, 48503
Gm48499 13 16943846 to 16945569 1723 + pseudogene predicted gene, 48499
Cd4ts6 13 16993960 to 16994099 139 QTL CD4 T cell subset 6
D13Mit57 13 16993960 to 16994099 139 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 57
Igmsc1 13 16993960 to 44765084 27771124 QTL immunoglobulin M secreting cells 1
D13Mit174 13 17014923 to 17015046 123 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 174
Pbd2 13 17014923 to 38763430 21748507 QTL peak bone density 2
Eosn2 13 17046726 to 17046726 0 QTL eosinophil differential 2
Gm27043 13 17050921 to 17051878 957 + pseudogene predicted gene, 27043
Gm25020 13 17206021 to 17206127 106 + snRNA gene predicted gene, 25020
Tssr121521 13 17215511 to 17215550 39 - TSS region transcription start site region 121521
Gm48502 13 17258771 to 17261641 2870 + unclassified gene predicted gene, 48502
Tssr118485 13 17310878 to 17310882 4 + TSS region transcription start site region 118485
Gm17890 13 17337599 to 17338355 756 + pseudogene predicted gene, 17890
Gm48501 13 17360294 to 17364134 3840 + pseudogene predicted gene, 48501
Gm24873 13 17440790 to 17440896 106 + snRNA gene predicted gene, 24873