Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:15722594-16332610

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104 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gli3 13 15463723 to 15730026 266303 + protein coding gene GLI-Kruppel family member GLI3
Cpgi5294 13 15759124 to 15759600 476 CpG island CpG island 5294
Gm48408 13 15768990 to 15770120 1130 - unclassified gene predicted gene, 48408
Tssr4000 13 15771571 to 15771578 7 + TSS region transcription start site region 4000
Tssr121504 13 15777610 to 15777615 5 - TSS region transcription start site region 121504
4933412O06Rik 13 15781664 to 15802630 20966 - lincRNA gene RIKEN cDNA 4933412O06 gene
Tssr121505 13 15802627 to 15802638 11 - TSS region transcription start site region 121505
Tssr118418 13 15807241 to 15807243 2 + TSS region transcription start site region 118418
A530046M15Rik 13 15807243 to 15827537 20294 + lincRNA gene RIKEN cDNA A530046M15 gene
B230303A05Rik 13 15813548 to 16023423 209875 - pseudogene RIKEN cDNA B230303A05 gene
Gm48907 13 15814712 to 15815429 717 - pseudogene predicted gene, 48907
A530058O07Rik 13 15817316 to 15820679 3363 + unclassified gene RIKEN cDNA A530058O07 gene
D13Mit237 13 15842639 to 15842753 114 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 237
Tssr118419 13 15848319 to 15848340 21 + TSS region transcription start site region 118419
Tssr118420 13 15850946 to 15850950 4 + TSS region transcription start site region 118420
Tssr118421 13 15851026 to 15851035 9 + TSS region transcription start site region 118421
Tssr118422 13 15852537 to 15852539 2 + TSS region transcription start site region 118422
Tssr121506 13 15853105 to 15853114 9 - TSS region transcription start site region 121506
Tssr121507 13 15853133 to 15853153 20 - TSS region transcription start site region 121507
Tssr121508 13 15902506 to 15902523 17 - TSS region transcription start site region 121508
Tssr121509 13 15908746 to 15908764 18 - TSS region transcription start site region 121509
Tssr121510 13 15908789 to 15908801 12 - TSS region transcription start site region 121510
Tssr121511 13 15908855 to 15908882 27 - TSS region transcription start site region 121511
Tssr121512 13 15914355 to 15914363 8 - TSS region transcription start site region 121512
Tssr121513 13 15914377 to 15914393 16 - TSS region transcription start site region 121513
Tssr118423 13 15922191 to 15922199 8 + TSS region transcription start site region 118423
Tssr118424 13 15930231 to 15930236 5 + TSS region transcription start site region 118424
Tssr118425 13 15931679 to 15931683 4 + TSS region transcription start site region 118425
Gm31450 13 15931682 to 15934681 2999 + lincRNA gene predicted gene, 31450
Gm48928 13 15969864 to 15970410 546 - pseudogene predicted gene, 48928
Tssr121514 13 15980398 to 15980403 5 - TSS region transcription start site region 121514
Tssr118426 13 15994176 to 15994182 6 + TSS region transcription start site region 118426
Tssr118427 13 15994270 to 15994278 8 + TSS region transcription start site region 118427
Tssr121515 13 16003996 to 16004001 5 - TSS region transcription start site region 121515
Cpgi5295 13 16011812 to 16012567 755 CpG island CpG island 5295
Tssr118428 13 16011826 to 16011843 17 + TSS region transcription start site region 118428
Inhba 13 16011851 to 16031621 19770 + protein coding gene inhibin beta-A
Tssr118429 13 16011920 to 16011949 29 + TSS region transcription start site region 118429
Tssr118430 13 16012230 to 16012267 37 + TSS region transcription start site region 118430
Tssr118431 13 16014397 to 16014408 11 + TSS region transcription start site region 118431
Tssr118432 13 16014421 to 16014439 18 + TSS region transcription start site region 118432
Tssr118433 13 16014441 to 16014452 11 + TSS region transcription start site region 118433
Tssr118434 13 16014457 to 16014473 16 + TSS region transcription start site region 118434
Tssr118435 13 16016328 to 16016340 12 + TSS region transcription start site region 118435
Tssr118436 13 16016684 to 16016706 22 + TSS region transcription start site region 118436
Tssr118437 13 16016924 to 16016942 18 + TSS region transcription start site region 118437
Tssr118438 13 16017047 to 16017056 9 + TSS region transcription start site region 118438
Tssr118439 13 16017064 to 16017104 40 + TSS region transcription start site region 118439
Tssr118440 13 16017283 to 16017298 15 + TSS region transcription start site region 118440
Cpgi5296 13 16017324 to 16017797 473 CpG island CpG island 5296
Tssr118441 13 16017373 to 16017413 40 + TSS region transcription start site region 118441
Tssr118442 13 16017619 to 16017633 14 + TSS region transcription start site region 118442
Tssr118443 13 16018100 to 16018117 17 + TSS region transcription start site region 118443
Tssr118444 13 16018167 to 16018178 11 + TSS region transcription start site region 118444
Tssr118445 13 16019919 to 16019935 16 + TSS region transcription start site region 118445
Tssr118446 13 16021673 to 16021693 20 + TSS region transcription start site region 118446
Tssr121516 13 16023401 to 16023437 36 - TSS region transcription start site region 121516
Gm48444 13 16025382 to 16032275 6893 - antisense lncRNA gene predicted gene, 48444
Tssr118447 13 16026419 to 16026424 5 + TSS region transcription start site region 118447
Tssr118448 13 16026447 to 16026458 11 + TSS region transcription start site region 118448
Tssr118449 13 16026532 to 16026543 11 + TSS region transcription start site region 118449
Tssr121517 13 16026627 to 16026673 46 - TSS region transcription start site region 121517
Tssr118450 13 16026776 to 16026783 7 + TSS region transcription start site region 118450
Tssr118451 13 16026838 to 16026849 11 + TSS region transcription start site region 118451
Tssr118452 13 16026900 to 16026911 11 + TSS region transcription start site region 118452
Tssr118453 13 16026934 to 16026945 11 + TSS region transcription start site region 118453
Tssr118454 13 16026979 to 16027002 23 + TSS region transcription start site region 118454
Tssr118455 13 16027030 to 16027045 15 + TSS region transcription start site region 118455
Tssr118456 13 16027064 to 16027076 12 + TSS region transcription start site region 118456
Tssr118457 13 16027083 to 16027095 12 + TSS region transcription start site region 118457
Tssr118458 13 16027104 to 16027131 27 + TSS region transcription start site region 118458
Tssr118459 13 16027142 to 16027163 21 + TSS region transcription start site region 118459
Tssr121518 13 16027178 to 16027194 16 - TSS region transcription start site region 121518
Tssr118460 13 16027197 to 16027222 25 + TSS region transcription start site region 118460
Tssr121519 13 16027322 to 16027341 19 - TSS region transcription start site region 121519
Tssr118461 13 16027326 to 16027369 43 + TSS region transcription start site region 118461
Tssr118462 13 16027399 to 16027414 15 + TSS region transcription start site region 118462
Tssr118463 13 16027417 to 16027443 26 + TSS region transcription start site region 118463
Tssr118464 13 16027471 to 16027485 14 + TSS region transcription start site region 118464
Tssr118465 13 16027498 to 16027509 11 + TSS region transcription start site region 118465
Tssr118466 13 16027546 to 16027561 15 + TSS region transcription start site region 118466
Tssr118467 13 16027581 to 16027592 11 + TSS region transcription start site region 118467
Tssr118468 13 16027594 to 16027610 16 + TSS region transcription start site region 118468
Tssr118469 13 16027620 to 16027642 22 + TSS region transcription start site region 118469
Tssr118470 13 16027833 to 16027852 19 + TSS region transcription start site region 118470
Tssr118471 13 16027984 to 16027995 11 + TSS region transcription start site region 118471
Tssr118472 13 16028013 to 16028032 19 + TSS region transcription start site region 118472
Tssr118473 13 16028299 to 16028308 9 + TSS region transcription start site region 118473
Tssr118474 13 16028551 to 16028567 16 + TSS region transcription start site region 118474
Tssr118475 13 16028837 to 16028856 19 + TSS region transcription start site region 118475
Tssr118476 13 16029027 to 16029040 13 + TSS region transcription start site region 118476
Tssr118477 13 16029187 to 16029200 13 + TSS region transcription start site region 118477
Tssr118478 13 16029955 to 16029974 19 + TSS region transcription start site region 118478
Tssr118479 13 16030578 to 16030597 19 + TSS region transcription start site region 118479
Tssr118480 13 16030808 to 16030825 17 + TSS region transcription start site region 118480
Tssr118481 13 16030957 to 16030973 16 + TSS region transcription start site region 118481
Tssr118482 13 16031048 to 16031059 11 + TSS region transcription start site region 118482
Tssr118483 13 16031086 to 16031105 19 + TSS region transcription start site region 118483
AI256733 13 16032247 to 16032453 206 DNA segment EST AI256733
Gm22628 13 16041046 to 16041152 106 - snRNA gene predicted gene, 22628
Gm6562 13 16045641 to 16046104 463 + pseudogene predicted gene 6562
Gm31711 13 16213569 to 16213764 195 - lncRNA gene predicted gene, 31711
Tssr121520 13 16261325 to 16261348 23 - TSS region transcription start site region 121520
Gm48491 13 16273191 to 16277838 4647 - lincRNA gene predicted gene, 48491