Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:15507091-15907215

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gli3 13 15463723 to 15730026 266303 + protein coding gene GLI-Kruppel family member GLI3
Tssr118413 13 15534464 to 15534467 3 + TSS region transcription start site region 118413
Tssr118414 13 15550917 to 15550922 5 + TSS region transcription start site region 118414
Tssr118415 13 15606371 to 15606378 7 + TSS region transcription start site region 118415
Tssr118416 13 15613837 to 15613850 13 + TSS region transcription start site region 118416
Tssr118417 13 15648093 to 15648097 4 + TSS region transcription start site region 118417
Gm48343 13 15649935 to 15650145 210 + pseudogene predicted gene, 48343
D13Mit264 13 15707091 to 15707215 124 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 264
Cpgi5294 13 15759124 to 15759600 476 CpG island CpG island 5294
Gm48408 13 15768990 to 15770120 1130 - unclassified gene predicted gene, 48408
Tssr4000 13 15771571 to 15771578 7 + TSS region transcription start site region 4000
Tssr121504 13 15777610 to 15777615 5 - TSS region transcription start site region 121504
4933412O06Rik 13 15781664 to 15802630 20966 - lincRNA gene RIKEN cDNA 4933412O06 gene
Tssr121505 13 15802627 to 15802638 11 - TSS region transcription start site region 121505
Tssr118418 13 15807241 to 15807243 2 + TSS region transcription start site region 118418
A530046M15Rik 13 15807243 to 15827537 20294 + lincRNA gene RIKEN cDNA A530046M15 gene
B230303A05Rik 13 15813548 to 16023423 209875 - pseudogene RIKEN cDNA B230303A05 gene
Gm48907 13 15814712 to 15815429 717 - pseudogene predicted gene, 48907
A530058O07Rik 13 15817316 to 15820679 3363 + unclassified gene RIKEN cDNA A530058O07 gene
D13Mit237 13 15842639 to 15842753 114 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 237
Tssr118419 13 15848319 to 15848340 21 + TSS region transcription start site region 118419
Tssr118420 13 15850946 to 15850950 4 + TSS region transcription start site region 118420
Tssr118421 13 15851026 to 15851035 9 + TSS region transcription start site region 118421
Tssr118422 13 15852537 to 15852539 2 + TSS region transcription start site region 118422
Tssr121506 13 15853105 to 15853114 9 - TSS region transcription start site region 121506
Tssr121507 13 15853133 to 15853153 20 - TSS region transcription start site region 121507
Tssr121508 13 15902506 to 15902523 17 - TSS region transcription start site region 121508