Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:13560534-13970548

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr121480 13 13564689 to 13564714 25 - TSS region transcription start site region 121480
D13Sfk5 13 13567262 to 13567416 154 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 5
Tssr118363 13 13574124 to 13574156 32 + TSS region transcription start site region 118363
Tssr118364 13 13576592 to 13576626 34 + TSS region transcription start site region 118364
D13Sfk18 13 13581646 to 13581765 119 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 18
Gm30836 13 13586046 to 13591868 5822 - lncRNA gene predicted gene, 30836
Cpgi5285 13 13590087 to 13591073 986 CpG island CpG island 5285
Tssr121481 13 13590124 to 13590132 8 - TSS region transcription start site region 121481
Tssr118365 13 13590316 to 13590338 22 + TSS region transcription start site region 118365
Tssr118366 13 13590369 to 13590376 7 + TSS region transcription start site region 118366
Lyst 13 13590397 to 13778803 188406 + protein coding gene lysosomal trafficking regulator
Tssr118367 13 13590402 to 13590456 54 + TSS region transcription start site region 118367
Tssr118368 13 13590459 to 13590471 12 + TSS region transcription start site region 118368
D13Sfk16 13 13599223 to 13599298 75 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 16
Tssr118369 13 13628425 to 13628445 20 + TSS region transcription start site region 118369
Tssr118370 13 13634939 to 13634964 25 + TSS region transcription start site region 118370
Tssr118371 13 13638279 to 13638296 17 + TSS region transcription start site region 118371
Tssr118372 13 13694452 to 13694463 11 + TSS region transcription start site region 118372
Tssr118373 13 13698702 to 13698714 12 + TSS region transcription start site region 118373
Tssr118374 13 13699196 to 13699211 15 + TSS region transcription start site region 118374
Tssr118375 13 13709946 to 13709965 19 + TSS region transcription start site region 118375
Tssr118376 13 13710219 to 13710238 19 + TSS region transcription start site region 118376
Tssr118377 13 13712716 to 13712735 19 + TSS region transcription start site region 118377
Tssr118378 13 13712772 to 13712787 15 + TSS region transcription start site region 118378
D13Sfk15 13 13726148 to 13726207 59 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 15
Tssr118379 13 13765534 to 13765548 14 + TSS region transcription start site region 118379
Tssr118380 13 13769362 to 13769376 14 + TSS region transcription start site region 118380
Cpgi5286 13 13783787 to 13785653 1866 CpG island CpG island 5286
Tssr118381 13 13784018 to 13784068 50 + TSS region transcription start site region 118381
Gng4 13 13784059 to 13827895 43836 + protein coding gene guanine nucleotide binding protein (G protein), gamma 4
Tssr118382 13 13784278 to 13784365 87 + TSS region transcription start site region 118382
Tssr118383 13 13784370 to 13784414 44 + TSS region transcription start site region 118383
Gm25271 13 13789344 to 13789633 289 + unclassified non-coding RNA gene predicted gene, 25271
D13Sfk19 13 13793948 to 13794110 162 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 19
D13Sfk17 13 13825379 to 13825453 74 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 17
Tssr118384 13 13825450 to 13825463 13 + TSS region transcription start site region 118384
Gm7441 13 13842242 to 13844250 2008 + pseudogene predicted gene 7441
Tssr3997 13 13845588 to 13845589 1 + TSS region transcription start site region 3997
Gm47882 13 13862534 to 13893979 31445 + lincRNA gene predicted gene, 47882
Tssr121482 13 13862905 to 13862912 7 - TSS region transcription start site region 121482
Gm7446 13 13890760 to 13891999 1239 - pseudogene predicted gene 7446
Gm7046 13 13895807 to 13910408 14601 - pseudogene predicted gene 7046
Gm47884 13 13953219 to 13954338 1119 + bidirectional promoter lncRNA gene predicted gene, 47884
Cpgi5287 13 13953881 to 13955394 1513 CpG island CpG island 5287
Tssr121483 13 13954332 to 13954370 38 - TSS region transcription start site region 121483
B3galnt2 13 13954474 to 13999088 44614 + protein coding gene UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
Tssr118385 13 13954539 to 13954555 16 + TSS region transcription start site region 118385
Tssr118386 13 13954614 to 13954691 77 + TSS region transcription start site region 118386
Tssr118387 13 13954694 to 13954705 11 + TSS region transcription start site region 118387
Gm18856 13 13964475 to 13965860 1385 - pseudogene predicted gene, 18856
Tssr121484 13 13968897 to 13968923 26 - TSS region transcription start site region 121484