Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:12544755-13216197

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30239 13 12540143 to 12562716 22573 + lincRNA gene predicted gene, 30239
Cpgi5281 13 12565579 to 12566645 1066 CpG island CpG island 5281
Ero1lb 13 12565808 to 12609533 43725 + protein coding gene ERO1-like beta (S. cerevisiae)
Tssr118348 13 12565868 to 12565879 11 + TSS region transcription start site region 118348
Tssr118349 13 12565891 to 12565914 23 + TSS region transcription start site region 118349
Tssr118350 13 12565926 to 12565940 14 + TSS region transcription start site region 118350
Tssr118351 13 12565955 to 12565962 7 + TSS region transcription start site region 118351
Gm25483 13 12589565 to 12589791 226 + snoRNA gene predicted gene, 25483
Gpr137b-ps 13 12615057 to 12650388 35331 - pseudogene G protein-coupled receptor 137B, pseudogene
Tssr121466 13 12616082 to 12616085 3 - TSS region transcription start site region 121466
Cpgi5282 13 12650153 to 12650472 319 CpG island CpG island 5282
Tssr121467 13 12650183 to 12650222 39 - TSS region transcription start site region 121467
Tssr121468 13 12650318 to 12650357 39 - TSS region transcription start site region 121468
Gm24065 13 12666051 to 12666314 263 + unclassified non-coding RNA gene predicted gene, 24065
Gm48440 13 12675601 to 12675957 356 - pseudogene predicted gene, 48440
Gm48445 13 12679747 to 12679939 192 - pseudogene predicted gene, 48445
Gm48455 13 12679940 to 12680359 419 + pseudogene predicted gene, 48455
Gm48456 13 12682289 to 12683041 752 + pseudogene predicted gene, 48456
Gm48458 13 12683610 to 12684013 403 - pseudogene predicted gene, 48458
Gm2399 13 12702362 to 12702586 224 + protein coding gene predicted gene 2399
D13Mit114 13 12714758 to 12714904 146 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 114
Gm7042 13 12734379 to 12734762 383 + pseudogene predicted gene 7042
Prl2c3 13 12790816 to 12800079 9263 - protein coding gene prolactin family 2, subfamily c, member 3
Tssr121469 13 12800077 to 12800081 4 - TSS region transcription start site region 121469
Gm18262 13 12864124 to 12866069 1945 + pseudogene predicted gene, 18262
Gm2544 13 12866723 to 12873784 7061 - pseudogene predicted gene 2544
Gm18878 13 12879755 to 12881197 1442 - pseudogene predicted gene, 18878
Tssr121470 13 12912996 to 12912998 2 - TSS region transcription start site region 121470
Gm48527 13 12917710 to 12917965 255 - pseudogene predicted gene, 48527
Gm40904 13 12925762 to 12932245 6483 + lncRNA gene predicted gene, 40904
Prl2c2 13 12996120 to 13005330 9210 - protein coding gene prolactin family 2, subfamily c, member 2
Tssr121471 13 13005391 to 13005394 3 - TSS region transcription start site region 121471
Gm40903 13 13030789 to 13033906 3117 + lncRNA gene predicted gene, 40903
Tssr118352 13 13030976 to 13030979 3 + TSS region transcription start site region 118352
Gm48544 13 13034858 to 13038936 4078 + lincRNA gene predicted gene, 48544
Gm18263 13 13076118 to 13078045 1927 + pseudogene predicted gene, 18263
Gm32300 13 13078699 to 13081305 2606 - pseudogene predicted gene, 32300
Gm18879 13 13103874 to 13105410 1536 + pseudogene predicted gene, 18879
Gm9628 13 13113355 to 13118597 5242 + pseudogene predicted gene 9628
Gm18259 13 13119254 to 13121263 2009 - pseudogene predicted gene, 18259
Gm10811 13 13168730 to 13171177 2447 - protein coding gene predicted gene 10811
Tssr118353 13 13182712 to 13182717 5 + TSS region transcription start site region 118353
Prl2c5 13 13182715 to 13191923 9208 + protein coding gene prolactin family 2, subfamily c, member 5
Gm18880 13 13197379 to 13198919 1540 + pseudogene predicted gene, 18880
Gm48588 13 13204876 to 13207550 2674 + pseudogene predicted gene, 48588