Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:119418039-119680459

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6142 13 119428282 to 119429876 1594 CpG island CpG island 6142
Tssr121251 13 119428382 to 119428385 3 + TSS region transcription start site region 121251
Tssr121252 13 119428396 to 119428413 17 + TSS region transcription start site region 121252
Tssr121253 13 119428416 to 119428446 30 + TSS region transcription start site region 121253
Tssr121254 13 119428449 to 119428485 36 + TSS region transcription start site region 121254
Tssr121255 13 119428490 to 119428504 14 + TSS region transcription start site region 121255
Tssr121256 13 119428561 to 119428575 14 + TSS region transcription start site region 121256
Tssr121257 13 119428583 to 119428612 29 + TSS region transcription start site region 121257
Paip1 13 119428601 to 119458218 29617 + protein coding gene polyadenylate binding protein-interacting protein 1
Tssr121258 13 119428888 to 119428960 72 + TSS region transcription start site region 121258
Tssr121259 13 119429265 to 119429272 7 + TSS region transcription start site region 121259
Tssr121260 13 119429669 to 119429680 11 + TSS region transcription start site region 121260
Tssr121261 13 119429715 to 119429730 15 + TSS region transcription start site region 121261
Tssr121262 13 119457134 to 119457138 4 + TSS region transcription start site region 121262
Cpgi6143 13 119462585 to 119463181 596 CpG island CpG island 6143
Tssr121263 13 119462752 to 119462810 58 + TSS region transcription start site region 121263
4833420G17Rik 13 119462768 to 119486120 23352 + protein coding gene RIKEN cDNA 4833420G17 gene
Tssr121264 13 119462835 to 119462856 21 + TSS region transcription start site region 121264
Tgq24 13 119466094 to 119466094 0 QTL triglyceride QTL 24
Tssr121265 13 119466393 to 119466397 4 + TSS region transcription start site region 121265
Gm9752 13 119473804 to 119476761 2957 - unclassified non-coding RNA gene predicted gene 9752
3110070M22Rik 13 119487261 to 119488383 1122 - unclassified gene RIKEN cDNA 3110070M22 gene
Cpgi6144 13 119487759 to 119489202 1443 CpG island CpG island 6144
Tmem267 13 119488039 to 119610459 122420 + protein coding gene transmembrane protein 267
Tssr121266 13 119488080 to 119488093 13 + TSS region transcription start site region 121266
Tssr121267 13 119488116 to 119488124 8 + TSS region transcription start site region 121267
Tssr124201 13 119488334 to 119488389 55 - TSS region transcription start site region 124201
Tssr124202 13 119488402 to 119488411 9 - TSS region transcription start site region 124202
Tssr121268 13 119488425 to 119488478 53 + TSS region transcription start site region 121268
Tssr121269 13 119488487 to 119488529 42 + TSS region transcription start site region 121269
Tssr121270 13 119488661 to 119488736 75 + TSS region transcription start site region 121270
Tssr121271 13 119488809 to 119488837 28 + TSS region transcription start site region 121271
Cpgi6145 13 119494984 to 119495472 488 CpG island CpG island 6145
Tssr4184 13 119597787 to 119597805 18 - TSS region transcription start site region 4184
Tssr4185 13 119598005 to 119598039 34 - TSS region transcription start site region 4185
Tssr4186 13 119601513 to 119601531 18 - TSS region transcription start site region 4186
Gm48265 13 119609765 to 119613472 3707 - lincRNA gene predicted gene, 48265
Tssr4187 13 119613858 to 119613878 20 - TSS region transcription start site region 4187
Tssr4188 13 119623796 to 119623811 15 + TSS region transcription start site region 4188
Ccl28 13 119623819 to 119654359 30540 + protein coding gene chemokine (C-C motif) ligand 28
Tssr4189 13 119623826 to 119623869 43 + TSS region transcription start site region 4189
Tssr4190 13 119649406 to 119649445 39 + TSS region transcription start site region 4190
Gm48300 13 119655462 to 119655858 396 - pseudogene predicted gene, 48300
Tssr4191 13 119680038 to 119680059 21 + TSS region transcription start site region 4191
1700074H08Rik 13 119680042 to 119681582 1540 + lincRNA gene RIKEN cDNA 1700074H08 gene