Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:118714697-119434822

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Svtms 13 107477080 to 119339836 11862756 QTL survival time modifier of Sod2
Hipq1 13 110272953 to 119339836 9066883 QTL hyperinsulin production QTL 1
Ssrq11 13 116906406 to 118829453 1923047 QTL stress response QTL 11
Gm16263 13 118695292 to 118715396 20104 - antisense lncRNA gene predicted gene 16263
Gm3247 13 118712696 to 118715039 2343 unclassified gene predicted gene 3247
Cpgi6139 13 118714229 to 118714946 717 CpG island CpG island 6139
Tssr121245 13 118714678 to 118714701 23 + TSS region transcription start site region 121245
Fgf10 13 118714699 to 118792573 77874 + protein coding gene fibroblast growth factor 10
Tssr121246 13 118714911 to 118714950 39 + TSS region transcription start site region 121246
Tssr121247 13 118715012 to 118715027 15 + TSS region transcription start site region 121247
Cpgi6140 13 118715064 to 118715484 420 CpG island CpG island 6140
Tssr124187 13 118715657 to 118715669 12 - TSS region transcription start site region 124187
Tssr124188 13 118715686 to 118715735 49 - TSS region transcription start site region 124188
Tssr121248 13 118732824 to 118732827 3 + TSS region transcription start site region 121248
Tssr121249 13 118790480 to 118790485 5 + TSS region transcription start site region 121249
D13Mit78 13 118829225 to 118829453 228 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 78
Gm47335 13 118858145 to 118858414 269 - pseudogene predicted gene, 47335
D13Mit131 13 119074697 to 119074822 125 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 131
D13Dcr17 13 119246624 to 119246730 106 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 17
Gm44488 13 119269486 to 119269604 118 - miRNA gene predicted gene, 44488
Gm47336 13 119271619 to 119279545 7926 - lincRNA gene predicted gene, 47336
Nnt 13 119335527 to 119409257 73730 - protein coding gene nicotinamide nucleotide transhydrogenase
D13Mit35 13 119339644 to 119339836 192 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 35
Tssr124189 13 119339914 to 119339938 24 - TSS region transcription start site region 124189
Tssr124190 13 119353202 to 119353221 19 - TSS region transcription start site region 124190
Tssr124191 13 119376264 to 119376268 4 - TSS region transcription start site region 124191
Tssr124192 13 119389283 to 119389285 2 - TSS region transcription start site region 124192
Tssr124193 13 119399743 to 119399747 4 - TSS region transcription start site region 124193
Gm9777 13 119406126 to 119409426 3300 unclassified gene predicted gene 9777
Tssr124194 13 119408129 to 119408148 19 - TSS region transcription start site region 124194
Tssr124195 13 119408160 to 119408180 20 - TSS region transcription start site region 124195
Tssr121250 13 119408202 to 119408210 8 + TSS region transcription start site region 121250
Cpgi6141 13 119408682 to 119409304 622 CpG island CpG island 6141
Tssr124196 13 119408943 to 119408974 31 - TSS region transcription start site region 124196
Tssr124197 13 119408985 to 119409003 18 - TSS region transcription start site region 124197
Tssr124198 13 119409006 to 119409018 12 - TSS region transcription start site region 124198
Tssr124199 13 119409184 to 119409246 62 - TSS region transcription start site region 124199
Tssr124200 13 119409444 to 119409465 21 - TSS region transcription start site region 124200
Cpgi6142 13 119428282 to 119429876 1594 CpG island CpG island 6142
Tssr121251 13 119428382 to 119428385 3 + TSS region transcription start site region 121251
Tssr121252 13 119428396 to 119428413 17 + TSS region transcription start site region 121252
Tssr121253 13 119428416 to 119428446 30 + TSS region transcription start site region 121253
Tssr121254 13 119428449 to 119428485 36 + TSS region transcription start site region 121254
Tssr121255 13 119428490 to 119428504 14 + TSS region transcription start site region 121255
Tssr121256 13 119428561 to 119428575 14 + TSS region transcription start site region 121256
Tssr121257 13 119428583 to 119428612 29 + TSS region transcription start site region 121257
Paip1 13 119428601 to 119458218 29617 + protein coding gene polyadenylate binding protein-interacting protein 1
Tssr121258 13 119428888 to 119428960 72 + TSS region transcription start site region 121258
Tssr121259 13 119429265 to 119429272 7 + TSS region transcription start site region 121259
Tssr121260 13 119429669 to 119429680 11 + TSS region transcription start site region 121260
Tssr121261 13 119429715 to 119429730 15 + TSS region transcription start site region 121261