Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:116306448-117008591

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbqt5 13 103205109 to 116906680 13701571 QTL tibia bone quality traits 5
Isl1 13 116298281 to 116309689 11408 - protein coding gene ISL1 transcription factor, LIM/homeodomain
Cpgi6133 13 116309331 to 116310451 1120 CpG island CpG island 6133
Tssr124163 13 116309639 to 116309699 60 - TSS region transcription start site region 124163
Tssr121211 13 116309823 to 116309841 18 + TSS region transcription start site region 121211
Gm29764 13 116330763 to 116331538 775 - pseudogene predicted gene, 29764
Gm47912 13 116361198 to 116361694 496 - pseudogene predicted gene, 47912
Mdq5 13 116444425 to 116444425 0 QTL mammary ductal QTL 5
Gm47914 13 116558311 to 116677705 119394 - lincRNA gene predicted gene, 47914
Gm47913 13 116651448 to 116663591 12143 - lincRNA gene predicted gene, 47913
Gm23198 13 116675878 to 116675968 90 + rRNA gene predicted gene, 23198
Cpgi6134 13 116705573 to 116706256 683 CpG island CpG island 6134
4930435F18Rik 13 116802095 to 116838178 36083 - lincRNA gene RIKEN cDNA 4930435F18 gene
A930041H05Rik 13 116850843 to 116852227 1384 unclassified gene RIKEN cDNA A930041H05 gene
Parp8 13 116854820 to 117025537 170717 - protein coding gene poly (ADP-ribose) polymerase family, member 8
Tssr124164 13 116876370 to 116876384 14 - TSS region transcription start site region 124164
Tssr124165 13 116888990 to 116889003 13 - TSS region transcription start site region 124165
D13Mit77 13 116906406 to 116906680 274 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 77
Ssrq11 13 116906406 to 118829453 1923047 QTL stress response QTL 11
Tssr124166 13 116923922 to 116923939 17 - TSS region transcription start site region 124166
Tssr124167 13 116968704 to 116968706 2 - TSS region transcription start site region 124167