Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:115054396-115654587

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itga1 13 114958079 to 115101964 143885 - protein coding gene integrin alpha 1
Gm49395 13 115035273 to 115101921 66648 - protein coding gene predicted gene, 49395
Tssr124148 13 115056521 to 115056525 4 - TSS region transcription start site region 124148
Pelo 13 115088355 to 115090158 1803 - protein coding gene pelota mRNA surveillance and ribosome rescue factor
Cpgi6127 13 115089384 to 115090721 1337 CpG island CpG island 6127
Tssr121209 13 115089466 to 115089486 20 + TSS region transcription start site region 121209
Tssr121210 13 115089492 to 115089516 24 + TSS region transcription start site region 121210
Gm10734 13 115089501 to 115090987 1486 + antisense lncRNA gene predicted gene 10734
Tssr124149 13 115090123 to 115090241 118 - TSS region transcription start site region 124149
Cpgi6128 13 115101400 to 115102172 772 CpG island CpG island 6128
Tssr124150 13 115101535 to 115101544 9 - TSS region transcription start site region 124150
Tssr124151 13 115101558 to 115101573 15 - TSS region transcription start site region 124151
Tssr124152 13 115101618 to 115101656 38 - TSS region transcription start site region 124152
Tssr124153 13 115101679 to 115101715 36 - TSS region transcription start site region 124153
Tssr124154 13 115101717 to 115101744 27 - TSS region transcription start site region 124154
Tssr124155 13 115101754 to 115101778 24 - TSS region transcription start site region 124155
Tssr124156 13 115101795 to 115101802 7 - TSS region transcription start site region 124156
Tssr124157 13 115101804 to 115101824 20 - TSS region transcription start site region 124157
Tssr124158 13 115101872 to 115101890 18 - TSS region transcription start site region 124158
Tssr124159 13 115101891 to 115101907 16 - TSS region transcription start site region 124159
Tssr124160 13 115101909 to 115101984 75 - TSS region transcription start site region 124160
Tssr124161 13 115102138 to 115102141 3 - TSS region transcription start site region 124161
Gm41075 13 115109830 to 115135838 26008 + lncRNA gene predicted gene, 41075
Gm25985 13 115116127 to 115116233 106 + snRNA gene predicted gene, 25985
D13Mit171 13 115156429 to 115156577 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 171
Gm18759 13 115163608 to 115164820 1212 - pseudogene predicted gene, 18759
Gm47891 13 115282201 to 115282675 474 + pseudogene predicted gene, 47891
D13Mit214 13 115354396 to 115354587 191 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 214
Gm6035 13 115528556 to 115529772 1216 - pseudogene predicted gene 6035
Tssr124162 13 115529793 to 115529800 7 - TSS region transcription start site region 124162
D13Mit151 13 115551769 to 115551891 122 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 151