Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:114564234-115038061

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm25950 13 114580495 to 114580594 99 + miRNA gene predicted gene, 25950
4930467J12Rik 13 114586513 to 114607084 20571 - lincRNA gene RIKEN cDNA 4930467J12 gene
Cpgi6122 13 114603163 to 114603393 230 CpG island CpG island 6122
Tssr124138 13 114607097 to 114607106 9 - TSS region transcription start site region 124138
4930544M13Rik 13 114607237 to 114697822 90585 + lincRNA gene RIKEN cDNA 4930544M13 gene
4930521G14Rik 13 114635085 to 114636851 1766 unclassified gene RIKEN cDNA 4930521G14 gene
Gm34790 13 114784234 to 114818061 33827 - lncRNA gene predicted gene, 34790
Tssr121203 13 114803272 to 114803314 42 + TSS region transcription start site region 121203
Tssr121204 13 114803321 to 114803334 13 + TSS region transcription start site region 121204
Cpgi6123 13 114817741 to 114818487 746 CpG island CpG island 6123
Tssr121205 13 114818232 to 114818303 71 + TSS region transcription start site region 121205
Mocs2 13 114818237 to 114829420 11183 + protein coding gene molybdenum cofactor synthesis 2
Tssr121206 13 114824632 to 114824646 14 + TSS region transcription start site region 121206
Itga2 13 114835912 to 114932041 96129 - protein coding gene integrin alpha 2
Tssr121207 13 114839285 to 114839296 11 + TSS region transcription start site region 121207
Tssr124139 13 114854119 to 114854126 7 - TSS region transcription start site region 124139
Tssr124140 13 114854133 to 114854145 12 - TSS region transcription start site region 124140
Tssr124141 13 114854444 to 114854449 5 - TSS region transcription start site region 124141
Cpgi6124 13 114896517 to 114896987 470 CpG island CpG island 6124
Gm34845 13 114922899 to 114927758 4859 + lncRNA gene predicted gene, 34845
Cpgi6125 13 114931722 to 114932354 632 CpG island CpG island 6125
Tssr124142 13 114931936 to 114931948 12 - TSS region transcription start site region 124142
Tssr124143 13 114932035 to 114932066 31 - TSS region transcription start site region 124143
Tssr124144 13 114932070 to 114932109 39 - TSS region transcription start site region 124144
Tssr121208 13 114932205 to 114932222 17 + TSS region transcription start site region 121208
Gm47776 13 114934642 to 114935068 426 - pseudogene predicted gene, 47776
6230424C14Rik 13 114953099 to 114955731 2632 unclassified gene RIKEN cDNA 6230424C14 gene
Itga1 13 114958079 to 115101964 143885 - protein coding gene integrin alpha 1
Cpgi6126 13 114966489 to 114966647 158 CpG island CpG island 6126
Gm49395 13 115035273 to 115101921 66648 - protein coding gene predicted gene, 49395