Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:113868441-114370416

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arl15 13 113794508 to 114157462 362954 + protein coding gene ADP-ribosylation factor-like 15
Cpgi6115 13 113870491 to 113870796 305 CpG island CpG island 6115
Tssr121194 13 113870671 to 113870688 17 + TSS region transcription start site region 121194
Tssr124127 13 113880392 to 113880398 6 - TSS region transcription start site region 124127
Tssr124128 13 113881079 to 113881091 12 - TSS region transcription start site region 124128
Tssr121195 13 113881187 to 113881220 33 + TSS region transcription start site region 121195
6720427H10Rik 13 113972885 to 113976591 3706 unclassified gene RIKEN cDNA 6720427H10 gene
Tssr121196 13 113981481 to 113981495 14 + TSS region transcription start site region 121196
Tssr121197 13 113989750 to 113989753 3 + TSS region transcription start site region 121197
Tssr121198 13 114048487 to 114048492 5 + TSS region transcription start site region 121198
B430203I24Rik 13 114096296 to 114099562 3266 unclassified gene RIKEN cDNA B430203I24 gene
Tssr121199 13 114111174 to 114111176 2 + TSS region transcription start site region 121199
Tssr121200 13 114113564 to 114113568 4 + TSS region transcription start site region 121200
Gm47479 13 114118441 to 114120416 1975 - unclassified gene predicted gene, 47479
A430090L17Rik 13 114124348 to 114151592 27244 - antisense lncRNA gene RIKEN cDNA A430090L17 gene
Tssr124129 13 114149748 to 114149762 14 - TSS region transcription start site region 124129
A230102O21Rik 13 114153222 to 114154258 1036 unclassified gene RIKEN cDNA A230102O21 gene
Tssr124130 13 114156984 to 114157010 26 - TSS region transcription start site region 124130
Gm41072 13 114208989 to 114218138 9149 + lncRNA gene predicted gene, 41072
Gm37907 13 114227111 to 114237432 10321 + unclassified gene predicted gene, 37907
4631422I05Rik 13 114240878 to 114242640 1762 - unclassified gene RIKEN cDNA 4631422I05 gene
Gm47558 13 114281668 to 114284381 2713 - unclassified gene predicted gene, 47558
Ndufs4 13 114287795 to 114388094 100299 - protein coding gene NADH:ubiquinone oxidoreductase core subunit S4
B330018G23Rik 13 114299765 to 114303862 4097 unclassified gene RIKEN cDNA B330018G23 gene
Tssr121201 13 114335072 to 114335076 4 + TSS region transcription start site region 121201
Tssr124131 13 114337122 to 114337126 4 - TSS region transcription start site region 124131
D13Mit31 13 114337990 to 114338089 99 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 31