Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:112816949-113038101

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plpp1 13 112800792 to 112867894 67102 + protein coding gene phospholipid phosphatase 1
Tssr121154 13 112853231 to 112853252 21 + TSS region transcription start site region 121154
Mtrex 13 112867780 to 112927380 59600 - protein coding gene Mtr4 exosome RNA helicase
Tssr124080 13 112874124 to 112874133 9 - TSS region transcription start site region 124080
Gm26943 13 112884226 to 112885182 956 + pseudogene predicted gene, 26943
Cpgi6101 13 112926949 to 112928101 1152 CpG island CpG island 6101
Tssr124081 13 112927356 to 112927390 34 - TSS region transcription start site region 124081
Tssr124082 13 112927463 to 112927470 7 - TSS region transcription start site region 124082
Tssr124083 13 112927598 to 112927640 42 - TSS region transcription start site region 124083
Tssr121155 13 112927642 to 112927735 93 + TSS region transcription start site region 121155
Dhx29 13 112927793 to 112969187 41394 + protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 29
Tssr121156 13 112937554 to 112937560 6 + TSS region transcription start site region 121156
Gm8795 13 112937585 to 112938023 438 + pseudogene predicted gene 8795
Cpgi6102 13 112987148 to 112989165 2017 CpG island CpG island 6102
Ccno 13 112987802 to 112990777 2975 + protein coding gene cyclin O
Tssr121157 13 112987822 to 112987838 16 + TSS region transcription start site region 121157
Tssr121158 13 112987952 to 112987977 25 + TSS region transcription start site region 121158
Cpgi6103 13 112989464 to 112990020 556 CpG island CpG island 6103
Cpgi6104 13 112993482 to 112994653 1171 CpG island CpG island 6104
Tssr121159 13 112993793 to 112993820 27 + TSS region transcription start site region 121159
Tssr121160 13 112993822 to 112993838 16 + TSS region transcription start site region 121160
Tssr121161 13 112993840 to 112993869 29 + TSS region transcription start site region 121161
Mcidas 13 112993845 to 113000394 6549 + protein coding gene multiciliate differentiation and DNA synthesis associated cell cycle protein
Tssr121162 13 112993884 to 112993895 11 + TSS region transcription start site region 121162
6330437I11Rik 13 112997785 to 112999248 1463 unclassified non-coding RNA gene RIKEN cDNA 6330437I11 gene
Cpgi6105 13 112998363 to 112999183 820 CpG island CpG island 6105
Cpgi6106 13 113031745 to 113032556 811 CpG island CpG island 6106
Tssr121163 13 113032197 to 113032201 4 + TSS region transcription start site region 121163
Tssr121164 13 113033039 to 113033054 15 + TSS region transcription start site region 121164
Cpgi6107 13 113034896 to 113035526 630 CpG island CpG island 6107
Cdc20b 13 113035111 to 113091195 56084 + protein coding gene cell division cycle 20B
Tssr121165 13 113035227 to 113035231 4 + TSS region transcription start site region 121165
Mirc34 13 113035983 to 113037624 1641 complex/cluster/region microRNA cluster 34, including Mir449a through Mir449c
Mir449c 13 113035983 to 113036091 108 + miRNA gene microRNA 449c
Mir449b 13 113037419 to 113037498 79 + miRNA gene microRNA 449b
Mir449a 13 113037534 to 113037624 90 + miRNA gene microRNA 449a
Tssr121166 13 113037610 to 113037614 4 + TSS region transcription start site region 121166