MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:112622357-112682370

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ddx4	13	112598333 to 112652475	54142	-	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Tssr121139	13	112639465 to 112639477	12	+	TSS region	transcription start site region 121139
Tssr124069	13	112651417 to 112651421	4	-	TSS region	transcription start site region 124069
Cpgi6097	13	112651833 to 112652608	775		CpG island	CpG island 6097
Tssr124070	13	112652241 to 112652255	14	-	TSS region	transcription start site region 124070
Tssr124071	13	112652269 to 112652276	7	-	TSS region	transcription start site region 124071
Tssr124072	13	112652295 to 112652355	60	-	TSS region	transcription start site region 124072
Tssr124073	13	112652357 to 112652370	13	-	TSS region	transcription start site region 124073
Cpgi6098	13	112660590 to 112661086	496		CpG island	CpG island 6098
Tssr121140	13	112660671 to 112660682	11	+	TSS region	transcription start site region 121140
Tssr121141	13	112660739 to 112660795	56	+	TSS region	transcription start site region 121141
Slc38a9	13	112660751 to 112738749	77998	+	protein coding gene	solute carrier family 38, member 9
Gm47827	13	112669139 to 112685696	16557	-	antisense lncRNA gene	predicted gene, 47827
Tssr124074	13	112673249 to 112673264	15	-	TSS region	transcription start site region 124074
Tssr121142	13	112673365 to 112673374	9	+	TSS region	transcription start site region 121142
Tssr121143	13	112673382 to 112673416	34	+	TSS region	transcription start site region 121143
Tssr121144	13	112673426 to 112673433	7	+	TSS region	transcription start site region 121144