Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:112278451-112394002

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ankrd55 13 112288451 to 112384002 95551 + protein coding gene ankyrin repeat domain 55
Tssr121099 13 112288496 to 112288507 11 + TSS region transcription start site region 121099
Tssr121100 13 112288516 to 112288548 32 + TSS region transcription start site region 121100
Tssr121101 13 112288580 to 112288594 14 + TSS region transcription start site region 121101
Tssr121102 13 112288790 to 112288806 16 + TSS region transcription start site region 121102
Tssr124046 13 112289148 to 112289152 4 - TSS region transcription start site region 124046
Gm22768 13 112291121 to 112291273 152 + snRNA gene predicted gene, 22768
D13Mit53 13 112294423 to 112294569 146 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 53
W6q16 13 112294569 to 55572541 -56722028 QTL weight 6 weeks QTL 16
Mol3 13 112294569 to 75984481 -36310088 QTL modifier of LPS-response 3
Tailaq3 13 112294569 to 55572541 -56722028 QTL tail length adjusted QTL 3
Tailq3 13 112294569 to 55572541 -56722028 QTL tail length QTL 3
W10q17 13 112294569 to 55572541 -56722028 QTL weight 10 weeks QTL 17
Egaq4 13 112294569 to 87753866 -24540703 QTL early growth adjusted QTL 4
Tssr121103 13 112318389 to 112318405 16 + TSS region transcription start site region 121103
Tssr121104 13 112318416 to 112318437 21 + TSS region transcription start site region 121104
Tssr121105 13 112318447 to 112318458 11 + TSS region transcription start site region 121105
Tssr121106 13 112335929 to 112335942 13 + TSS region transcription start site region 121106
Tssr121107 13 112344739 to 112344745 6 + TSS region transcription start site region 121107
Tssr124047 13 112349221 to 112349246 25 - TSS region transcription start site region 124047
Gm41065 13 112351554 to 112355805 4251 - lncRNA gene predicted gene, 41065
Tssr124048 13 112354222 to 112354227 5 - TSS region transcription start site region 124048
Tssr124049 13 112354249 to 112354271 22 - TSS region transcription start site region 124049
Gm48837 13 112356925 to 112367845 10920 - antisense lncRNA gene predicted gene, 48837
Tssr121108 13 112363417 to 112363436 19 + TSS region transcription start site region 121108
Tssr121109 13 112363446 to 112363468 22 + TSS region transcription start site region 121109
D13Mit260 13 112365596 to 112365710 114 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 260
Rplag 13 112365596 to 112365710 114 QTL reduced platelet aggregation
Tssr121110 13 112366144 to 112366147 3 + TSS region transcription start site region 121110
Tssr121111 13 112367874 to 112367879 5 + TSS region transcription start site region 121111
Tssr121112 13 112367881 to 112367909 28 + TSS region transcription start site region 121112
Tssr121113 13 112373369 to 112373407 38 + TSS region transcription start site region 121113
D13Mit228 13 112388088 to 112388235 147 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 228