Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:111828357-112088360

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pbsq1 13 102000000 to 112000000 10000000 QTL percent broken sperm QTL 1
Gm41060 13 111819812 to 111838046 18234 + lncRNA gene predicted gene, 41060
Gm15325 13 111850316 to 111852622 2306 - lincRNA gene predicted gene 15325
Gm15324 13 111856996 to 111858505 1509 + lincRNA gene predicted gene 15324
Tssr121078 13 111867931 to 111867942 11 + TSS region transcription start site region 121078
Gm15326 13 111867936 to 111871937 4001 + lincRNA gene predicted gene 15326
Tssr121079 13 111867946 to 111867959 13 + TSS region transcription start site region 121079
Tssr121080 13 111868004 to 111868019 15 + TSS region transcription start site region 121080
Gm9025 13 111882252 to 111884419 2167 - pseudogene predicted gene 9025
Tssr124040 13 111884312 to 111884333 21 - TSS region transcription start site region 124040
Tssr124041 13 111884360 to 111884376 16 - TSS region transcription start site region 124041
Gct9 13 111900290 to 111900412 122 QTL granulosa cell tumorigenesis 9
D13Mit292 13 111900290 to 111900412 122 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 292
Tssr121081 13 111936206 to 111936233 27 + TSS region transcription start site region 121081
Tssr121082 13 111937089 to 111937095 6 + TSS region transcription start site region 121082
Tssr121083 13 111958357 to 111958360 3 + TSS region transcription start site region 121083
Cpgi6093 13 111977820 to 111978111 291 CpG island CpG island 6093
Tssr121084 13 111977960 to 111977990 30 + TSS region transcription start site region 121084
Tssr121085 13 111977999 to 111978008 9 + TSS region transcription start site region 121085
Tssr121086 13 111978017 to 111978024 7 + TSS region transcription start site region 121086
Tssr121087 13 111978103 to 111978112 9 + TSS region transcription start site region 121087
Tssr121088 13 111980626 to 111980655 29 + TSS region transcription start site region 121088
Tssr121089 13 111983026 to 111983059 33 + TSS region transcription start site region 121089
Tssr124042 13 111984049 to 111984060 11 - TSS region transcription start site region 124042
Tssr121090 13 111984278 to 111984288 10 + TSS region transcription start site region 121090
Gm15322 13 111991466 to 111995486 4020 + lincRNA gene predicted gene 15322
Tssr121091 13 112000031 to 112000043 12 + TSS region transcription start site region 121091
Gm15323 13 112001009 to 112012238 11229 + lincRNA gene predicted gene 15323
Tssr124043 13 112001187 to 112001195 8 - TSS region transcription start site region 124043
Tssr124044 13 112001240 to 112001252 12 - TSS region transcription start site region 124044
Tssr121092 13 112001415 to 112001426 11 + TSS region transcription start site region 121092
Tssr121093 13 112001434 to 112001443 9 + TSS region transcription start site region 121093
Tssr121094 13 112001901 to 112001924 23 + TSS region transcription start site region 121094
Gm41061 13 112038313 to 112041558 3245 - lncRNA gene predicted gene, 41061