Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:110392523-111643821

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bglu2 13 108828769 to 110563377 1734608 QTL blood glucose level 2
Tssr121035 13 110392921 to 110392960 39 + TSS region transcription start site region 121035
Cpgi6087 13 110394334 to 110395713 1379 CpG island CpG island 6087
Tssr121036 13 110394480 to 110394498 18 + TSS region transcription start site region 121036
Tssr121037 13 110394598 to 110394633 35 + TSS region transcription start site region 121037
Tssr124015 13 110394859 to 110394866 7 - TSS region transcription start site region 124015
Tssr121038 13 110395041 to 110395057 16 + TSS region transcription start site region 121038
Plk2 13 110395046 to 110400844 5798 + protein coding gene polo like kinase 2
Tssr121039 13 110395972 to 110395979 7 + TSS region transcription start site region 121039
Tssr121040 13 110396080 to 110396100 20 + TSS region transcription start site region 121040
Tssr121041 13 110396612 to 110396647 35 + TSS region transcription start site region 121041
Tssr121042 13 110396771 to 110396784 13 + TSS region transcription start site region 121042
Tssr121043 13 110396830 to 110396841 11 + TSS region transcription start site region 121043
Tssr121044 13 110396933 to 110396959 26 + TSS region transcription start site region 121044
Tssr121045 13 110396991 to 110397002 11 + TSS region transcription start site region 121045
Tssr121046 13 110397123 to 110397141 18 + TSS region transcription start site region 121046
Tssr121047 13 110397478 to 110397509 31 + TSS region transcription start site region 121047
Tssr124016 13 110397750 to 110397768 18 - TSS region transcription start site region 124016
Tssr121048 13 110397969 to 110397992 23 + TSS region transcription start site region 121048
Cpgi6088 13 110398992 to 110399319 327 CpG island CpG island 6088
Tssr121049 13 110399793 to 110399813 20 + TSS region transcription start site region 121049
Tssr121050 13 110399817 to 110399833 16 + TSS region transcription start site region 121050
Tssr121051 13 110399967 to 110399971 4 + TSS region transcription start site region 121051
Tssr121052 13 110400585 to 110400605 20 + TSS region transcription start site region 121052
Tssr121053 13 110400613 to 110400638 25 + TSS region transcription start site region 121053
Tssr121054 13 110400686 to 110400690 4 + TSS region transcription start site region 121054
Tssr4172 13 110415167 to 110415168 1 + TSS region transcription start site region 4172
D13Mit291 13 110439544 to 110439637 93 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 291
Tssr121055 13 110538431 to 110538434 3 + TSS region transcription start site region 121055
Tssr124017 13 110541358 to 110541385 27 - TSS region transcription start site region 124017
Tssr121056 13 110542062 to 110542066 4 + TSS region transcription start site region 121056
Tssr124018 13 110545444 to 110545461 17 - TSS region transcription start site region 124018
Tssr121057 13 110563224 to 110563229 5 + TSS region transcription start site region 121057
lg 13 110563270 to 112761890 2198620 heritable phenotypic marker lid gap
D13Mit76 13 110563270 to 110563377 107 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 76
Sod1m 13 110563377 to 99603460 -10959917 QTL superoxide dismutase 1, soluble, modifier
Gm32990 13 110568712 to 110578225 9513 + lncRNA gene predicted gene, 32990
Tssr124019 13 110601907 to 110601911 4 - TSS region transcription start site region 124019
Gm33045 13 110627288 to 110642730 15442 + lincRNA gene predicted gene, 33045
Tssr121058 13 110633759 to 110633761 2 + TSS region transcription start site region 121058
Gm41059 13 110642862 to 110656095 13233 + lncRNA gene predicted gene, 41059
Tssr121059 13 110683669 to 110683674 5 + TSS region transcription start site region 121059
Gm33172 13 110683826 to 110686694 2868 + lincRNA gene predicted gene, 33172
D13Rp3 13 110726199 to 110726359 160 DNA segment DNA segment, Chr 13, Roswell Park 3
D13Mit129 13 110738733 to 110738904 171 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 129
Heal2 13 110738733 to 110738904 171 QTL wound healing/regeneration 2
Tel-rs4 13 110743645 to 110744672 1027 unclassified gene telomere, related sequence 4
D13Rp4 13 110745106 to 110745235 129 DNA segment DNA segment, Chr 13, Roswell Park 4
Gm48533 13 110842905 to 110843121 216 - pseudogene predicted gene, 48533
Gm48534 13 110844574 to 110844936 362 - pseudogene predicted gene, 48534
Gm30839 13 110860413 to 110860671 258 - pseudogene predicted gene, 30839
Tssr121060 13 110864951 to 110864960 9 + TSS region transcription start site region 121060
4930526H09Rik 13 110882852 to 110903846 20994 - lincRNA gene RIKEN cDNA 4930526H09 gene
Gm38397 13 110903499 to 110908280 4781 + lincRNA gene predicted gene, 38397
Tssr124020 13 110941210 to 110941257 47 - TSS region transcription start site region 124020
Tssr121061 13 110943514 to 110943518 4 + TSS region transcription start site region 121061
Gm48547 13 111017523 to 111018821 1298 - pseudogene predicted gene, 48547
Gm18315 13 111175142 to 111176762 1620 - pseudogene predicted gene, 18315
3110015C05Rik 13 111211469 to 111229431 17962 - lincRNA gene RIKEN cDNA 3110015C05 gene
Tssr121062 13 111255010 to 111255018 8 + TSS region transcription start site region 121062
Actbl2 13 111255013 to 111257749 2736 + protein coding gene actin, beta-like 2
Gm15285 13 111361203 to 111361675 472 - pseudogene predicted gene 15285
Gm15289 13 111361676 to 111361919 243 + pseudogene predicted gene 15289
Gm6270 13 111361840 to 111368680 6840 - lincRNA gene predicted gene 6270
D13Mit230 13 111391865 to 111392012 147 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 230
Skmw18 13 111391865 to 111392012 147 QTL skeletal muscle weight 18
Gpbp1 13 111425680 to 111490111 64431 - protein coding gene GC-rich promoter binding protein 1
Gm49496 13 111439229 to 111549947 110718 - protein coding gene predicted gene, 49496
Tssr124021 13 111449223 to 111449272 49 - TSS region transcription start site region 124021
Tssr124022 13 111482321 to 111482334 13 - TSS region transcription start site region 124022
Cpgi6089 13 111488618 to 111490884 2266 CpG island CpG island 6089
Tssr124023 13 111489769 to 111489772 3 - TSS region transcription start site region 124023
Tssr124024 13 111489773 to 111489793 20 - TSS region transcription start site region 124024
Tssr124025 13 111489835 to 111489890 55 - TSS region transcription start site region 124025
Tssr124026 13 111489897 to 111489919 22 - TSS region transcription start site region 124026
Tssr124027 13 111489969 to 111489978 9 - TSS region transcription start site region 124027
Tssr124028 13 111490055 to 111490100 45 - TSS region transcription start site region 124028
Tssr124029 13 111490121 to 111490139 18 - TSS region transcription start site region 124029
Tssr124030 13 111509345 to 111509363 18 - TSS region transcription start site region 124030
Gm15290 13 111522350 to 111549911 27561 - lincRNA gene predicted gene 15290
Gm15288 13 111561372 to 111568553 7181 - antisense lncRNA gene predicted gene 15288
Tssr4173 13 111578040 to 111578043 3 + TSS region transcription start site region 4173
Tssr121063 13 111580260 to 111580291 31 + TSS region transcription start site region 121063
Gm15286 13 111580261 to 111644830 64569 + lncRNA gene predicted gene 15286
Tssr121064 13 111580598 to 111580604 6 + TSS region transcription start site region 121064
Gm10198 13 111592785 to 111592856 71 + protein coding gene predicted gene 10198
Gm10736 13 111593534 to 111593611 77 - pseudogene predicted gene 10736