Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:110277969-110517992

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rab3c 13 110054187 to 110280996 226809 - protein coding gene RAB3C, member RAS oncogene family
Cpgi6085 13 110279987 to 110280243 256 CpG island CpG island 6085
Tssr124007 13 110280065 to 110280074 9 - TSS region transcription start site region 124007
Tssr124008 13 110280079 to 110280094 15 - TSS region transcription start site region 124008
Tssr124009 13 110280103 to 110280213 110 - TSS region transcription start site region 124009
Cpgi6086 13 110280576 to 110280767 191 CpG island CpG island 6086
Tssr124010 13 110280654 to 110280671 17 - TSS region transcription start site region 124010
Tssr124011 13 110280839 to 110280858 19 - TSS region transcription start site region 124011
Tssr124012 13 110280886 to 110280906 20 - TSS region transcription start site region 124012
Tssr124013 13 110280991 to 110281037 46 - TSS region transcription start site region 124013
Gm5455 13 110304777 to 110305491 714 - pseudogene predicted pseudogene 5455
Gapt 13 110352616 to 110357199 4583 - protein coding gene Grb2-binding adaptor, transmembrane
Tssr124014 13 110357136 to 110357195 59 - TSS region transcription start site region 124014
Gm41058 13 110358444 to 110383294 24850 + lncRNA gene predicted gene, 41058
Tssr121035 13 110392921 to 110392960 39 + TSS region transcription start site region 121035
Cpgi6087 13 110394334 to 110395713 1379 CpG island CpG island 6087
Tssr121036 13 110394480 to 110394498 18 + TSS region transcription start site region 121036
Tssr121037 13 110394598 to 110394633 35 + TSS region transcription start site region 121037
Tssr124015 13 110394859 to 110394866 7 - TSS region transcription start site region 124015
Tssr121038 13 110395041 to 110395057 16 + TSS region transcription start site region 121038
Plk2 13 110395046 to 110400844 5798 + protein coding gene polo like kinase 2
Tssr121039 13 110395972 to 110395979 7 + TSS region transcription start site region 121039
Tssr121040 13 110396080 to 110396100 20 + TSS region transcription start site region 121040
Tssr121041 13 110396612 to 110396647 35 + TSS region transcription start site region 121041
Tssr121042 13 110396771 to 110396784 13 + TSS region transcription start site region 121042
Tssr121043 13 110396830 to 110396841 11 + TSS region transcription start site region 121043
Tssr121044 13 110396933 to 110396959 26 + TSS region transcription start site region 121044
Tssr121045 13 110396991 to 110397002 11 + TSS region transcription start site region 121045
Tssr121046 13 110397123 to 110397141 18 + TSS region transcription start site region 121046
Tssr121047 13 110397478 to 110397509 31 + TSS region transcription start site region 121047
Tssr124016 13 110397750 to 110397768 18 - TSS region transcription start site region 124016
Tssr121048 13 110397969 to 110397992 23 + TSS region transcription start site region 121048
Cpgi6088 13 110398992 to 110399319 327 CpG island CpG island 6088
Tssr121049 13 110399793 to 110399813 20 + TSS region transcription start site region 121049
Tssr121050 13 110399817 to 110399833 16 + TSS region transcription start site region 121050
Tssr121051 13 110399967 to 110399971 4 + TSS region transcription start site region 121051
Tssr121052 13 110400585 to 110400605 20 + TSS region transcription start site region 121052
Tssr121053 13 110400613 to 110400638 25 + TSS region transcription start site region 121053
Tssr121054 13 110400686 to 110400690 4 + TSS region transcription start site region 121054
Tssr4172 13 110415167 to 110415168 1 + TSS region transcription start site region 4172
D13Mit291 13 110439544 to 110439637 93 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 291