Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:109313991-109854444

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mir582 13 109324744 to 109324824 80 + miRNA gene microRNA 582
Tssr4169 13 109342651 to 109342653 2 + TSS region transcription start site region 4169
B930063P07Rik 13 109344632 to 109351654 7022 unclassified gene RIKEN cDNA B930063P07 gene
Gm32813 13 109381471 to 109400142 18671 - lncRNA gene predicted gene, 32813
Gm32703 13 109425166 to 109441193 16027 - lncRNA gene predicted gene, 32703
Tssr121006 13 109441041 to 109441097 56 + TSS region transcription start site region 121006
Tssr121007 13 109441112 to 109441132 20 + TSS region transcription start site region 121007
Tssr121008 13 109441134 to 109441145 11 + TSS region transcription start site region 121008
9530083O12Rik 13 109458601 to 109463839 5238 unclassified gene RIKEN cDNA 9530083O12 gene
Tssr121009 13 109478816 to 109478844 28 + TSS region transcription start site region 121009
9130219B18Rik 13 109583991 to 109584444 453 unclassified gene RIKEN cDNA 9130219B18 gene
Tssr121010 13 109632558 to 109632562 4 + TSS region transcription start site region 121010
Tssr121011 13 109632626 to 109632701 75 + TSS region transcription start site region 121011
Tssr121012 13 109632707 to 109632718 11 + TSS region transcription start site region 121012
Tssr121013 13 109632760 to 109632790 30 + TSS region transcription start site region 121013
A730009E18Rik 13 109640919 to 109643185 2266 unclassified gene RIKEN cDNA A730009E18 gene
2210416J07Rik 13 109645655 to 109647892 2237 unclassified gene RIKEN cDNA 2210416J07 gene
4833406M21Rik 13 109649923 to 109651729 1806 unclassified gene RIKEN cDNA 4833406M21 gene
Tssr121014 13 109685466 to 109685486 20 + TSS region transcription start site region 121014
Tssr121015 13 109685498 to 109685543 45 + TSS region transcription start site region 121015
Tssr121016 13 109685555 to 109685584 29 + TSS region transcription start site region 121016
Cpgi6082 13 109685558 to 109685748 190 CpG island CpG island 6082
Tssr121017 13 109685994 to 109686018 24 + TSS region transcription start site region 121017
Tssr4170 13 109726447 to 109726448 1 - TSS region transcription start site region 4170
D13Mit317 13 109731178 to 109731302 124 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 317
Tssr121018 13 109757192 to 109757199 7 + TSS region transcription start site region 121018
A630036H22Rik 13 109820818 to 109822498 1680 unclassified gene RIKEN cDNA A630036H22 gene
Tssr123999 13 109822428 to 109822440 12 - TSS region transcription start site region 123999
Cpgi6083 13 109822463 to 109822646 183 CpG island CpG island 6083
Tssr124000 13 109837654 to 109837665 11 - TSS region transcription start site region 124000
Tssr121019 13 109837777 to 109837786 9 + TSS region transcription start site region 121019
Tssr121020 13 109837792 to 109837806 14 + TSS region transcription start site region 121020
Tssr121021 13 109837814 to 109837823 9 + TSS region transcription start site region 121021