Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:108107158-108387306

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ndufaf2 13 108052589 to 108158655 106066 - protein coding gene NADH:ubiquinone oxidoreductase complex assembly factor 2
Cpgi6075 13 108158062 to 108159233 1171 CpG island CpG island 6075
Tssr123996 13 108158584 to 108158630 46 - TSS region transcription start site region 123996
Tssr120967 13 108158723 to 108158754 31 + TSS region transcription start site region 120967
Ercc8 13 108158731 to 108195364 36633 + protein coding gene excision repaiross-complementing rodent repair deficiency, complementation group 8
Gm32268 13 108159582 to 108166383 6801 - lncRNA gene predicted gene, 32268
Tssr123997 13 108164083 to 108164087 4 - TSS region transcription start site region 123997
Tssr120968 13 108211260 to 108211283 23 + TSS region transcription start site region 120968
Cpgi6076 13 108214101 to 108215254 1153 CpG island CpG island 6076
Tssr120969 13 108214389 to 108214454 65 + TSS region transcription start site region 120969
Elovl7 13 108214404 to 108285683 71279 + protein coding gene ELOVL family member 7, elongation of long chain fatty acids (yeast)
Gm32376 13 108220468 to 108220841 373 - pseudogene predicted gene, 32376
Gm30747 13 108233089 to 108233555 466 - pseudogene predicted gene, 30747
Hrtfm6 13 108247158 to 108247306 148 QTL heart failure modifier 6
D13Mit213 13 108247158 to 108247306 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 213
Gm8990 13 108309202 to 108310750 1548 - pseudogene predicted gene 8990
Tssr123998 13 108310983 to 108310985 2 - TSS region transcription start site region 123998
Gm2822 13 108313099 to 108316273 3174 - unclassified non-coding RNA gene predicted gene 2822
Cpgi6077 13 108315970 to 108316937 967 CpG island CpG island 6077
Depdc1b 13 108316013 to 108389566 73553 + protein coding gene DEP domain containing 1B
Tssr120970 13 108316340 to 108316358 18 + TSS region transcription start site region 120970
Tssr120971 13 108316366 to 108316387 21 + TSS region transcription start site region 120971
Tssr120972 13 108316395 to 108316407 12 + TSS region transcription start site region 120972
Tssr120973 13 108326521 to 108326537 16 + TSS region transcription start site region 120973
Tssr4164 13 108326559 to 108326567 8 + TSS region transcription start site region 4164
5830433M15Rik 13 108328428 to 108329879 1451 unclassified gene RIKEN cDNA 5830433M15 gene
Tssr4165 13 108335897 to 108335898 1 + TSS region transcription start site region 4165
D13Mit170 13 108376858 to 108377055 197 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 170