MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:107954474-108139175

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm38557	13	107944838 to 107956079	11241	-	lncRNA gene	predicted gene, 38557
Tssr120960	13	107955576 to 107955583	7	+	TSS region	transcription start site region 120960
Tssr120961	13	107955598 to 107955617	19	+	TSS region	transcription start site region 120961
Gm41054	13	107978143 to 107981517	3374	-	lncRNA gene	predicted gene, 41054
Tssr120962	13	107996328 to 107996347	19	+	TSS region	transcription start site region 120962
B230220B15Rik	13	107999101 to 108004669	5568	+	lincRNA gene	RIKEN cDNA B230220B15 gene
Gm41055	13	108018764 to 108034753	15989	-	lncRNA gene	predicted gene, 41055
3021401N23Rik	13	108042120 to 108044411	2291		unclassified gene	RIKEN cDNA 3021401N23 gene
Cpgi6074	13	108043926 to 108045027	1101		CpG island	CpG island 6074
Tssr120963	13	108044055 to 108044105	50	+	TSS region	transcription start site region 120963
Tssr123995	13	108044301 to 108044354	53	-	TSS region	transcription start site region 123995
Tssr120964	13	108044421 to 108044497	76	+	TSS region	transcription start site region 120964
Smim15	13	108044474 to 108049175	4701	+	protein coding gene	small integral membrane protein 15
Tssr120965	13	108045660 to 108045662	2	+	TSS region	transcription start site region 120965
Tssr120966	13	108046411 to 108046419	8	+	TSS region	transcription start site region 120966
Ndufaf2	13	108052589 to 108158655	106066	-	protein coding gene	NADH:ubiquinone oxidoreductase complex assembly factor 2
D13Mit149	13	108102805 to 108102997	192		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 149