Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:107854101-108149669

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zswim6 13 107724617 to 107890064 165447 - protein coding gene zinc finger SWIM-type containing 6
Tssr123989 13 107857382 to 107857400 18 - TSS region transcription start site region 123989
Tssr123990 13 107858079 to 107858087 8 - TSS region transcription start site region 123990
9930031P18Rik 13 107863528 to 107867270 3742 unclassified gene RIKEN cDNA 9930031P18 gene
Tssr123991 13 107871233 to 107871238 5 - TSS region transcription start site region 123991
Gm41052 13 107877341 to 107878372 1031 + lncRNA gene predicted gene, 41052
Tssr123992 13 107885519 to 107885522 3 - TSS region transcription start site region 123992
Cpgi6073 13 107888356 to 107891799 3443 CpG island CpG island 6073
Tssr123993 13 107890059 to 107890073 14 - TSS region transcription start site region 123993
Tssr123994 13 107890075 to 107890084 9 - TSS region transcription start site region 123994
Tssr120958 13 107890640 to 107890658 18 + TSS region transcription start site region 120958
Tssr120959 13 107891085 to 107891100 15 + TSS region transcription start site region 120959
Gm41053 13 107923411 to 107930047 6636 + lncRNA gene predicted gene, 41053
Gm38557 13 107944838 to 107956079 11241 - lncRNA gene predicted gene, 38557
Tssr120960 13 107955576 to 107955583 7 + TSS region transcription start site region 120960
Tssr120961 13 107955598 to 107955617 19 + TSS region transcription start site region 120961
Gm41054 13 107978143 to 107981517 3374 - lncRNA gene predicted gene, 41054
Tssr120962 13 107996328 to 107996347 19 + TSS region transcription start site region 120962
B230220B15Rik 13 107999101 to 108004669 5568 + lincRNA gene RIKEN cDNA B230220B15 gene
Gm41055 13 108018764 to 108034753 15989 - lncRNA gene predicted gene, 41055
3021401N23Rik 13 108042120 to 108044411 2291 unclassified gene RIKEN cDNA 3021401N23 gene
Cpgi6074 13 108043926 to 108045027 1101 CpG island CpG island 6074
Tssr120963 13 108044055 to 108044105 50 + TSS region transcription start site region 120963
Tssr123995 13 108044301 to 108044354 53 - TSS region transcription start site region 123995
Tssr120964 13 108044421 to 108044497 76 + TSS region transcription start site region 120964
Smim15 13 108044474 to 108049175 4701 + protein coding gene small integral membrane protein 15
Tssr120965 13 108045660 to 108045662 2 + TSS region transcription start site region 120965
Tssr120966 13 108046411 to 108046419 8 + TSS region transcription start site region 120966
Ndufaf2 13 108052589 to 108158655 106066 - protein coding gene NADH:ubiquinone oxidoreductase complex assembly factor 2
D13Mit149 13 108102805 to 108102997 192 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 149