MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:107596375-107856401

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm32090	13	107605284 to 107612849	7565	-	lincRNA gene	predicted gene, 32090
Gm32186	13	107635752 to 107643271	7519	-	lncRNA gene	predicted gene, 32186
Cpgi6071	13	107645230 to 107645621	391		CpG island	CpG island 6071
Tssr120956	13	107687388 to 107687402	14	+	TSS region	transcription start site region 120956
1700006H21Rik	13	107687397 to 107692168	4771	+	lincRNA gene	RIKEN cDNA 1700006H21 gene
Tssr120957	13	107687405 to 107687412	7	+	TSS region	transcription start site region 120957
Zswim6	13	107724617 to 107890064	165447	-	protein coding gene	zinc finger SWIM-type containing 6
Tssr123983	13	107726375 to 107726401	26	-	TSS region	transcription start site region 123983
Tssr4163	13	107744253 to 107744254	1	+	TSS region	transcription start site region 4163
Tssr123984	13	107767966 to 107767978	12	-	TSS region	transcription start site region 123984
Tssr123985	13	107782590 to 107782602	12	-	TSS region	transcription start site region 123985
Tssr123986	13	107794812 to 107794820	8	-	TSS region	transcription start site region 123986
2900011L18Rik	13	107815463 to 107816701	1238		unclassified gene	RIKEN cDNA 2900011L18 gene
Tssr123987	13	107823548 to 107823553	5	-	TSS region	transcription start site region 123987
Gm22118	13	107829110 to 107829280	170	-	miRNA gene	predicted gene, 22118
Cpgi6072	13	107831164 to 107831392	228		CpG island	CpG island 6072
Tssr123988	13	107842302 to 107842310	8	-	TSS region	transcription start site region 123988
9530027D23Rik	13	107851976 to 107852740	764		unclassified gene	RIKEN cDNA 9530027D23 gene