Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:106646086-107226087

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45940 13 106712003 to 106722044 10041 - lncRNA gene predicted gene, 45940
Gm30411 13 106747070 to 106761579 14509 - lincRNA gene predicted gene, 30411
Gm24527 13 106780114 to 106780220 106 - snRNA gene predicted gene, 24527
Gm28989 13 106788070 to 106796796 8726 + antisense lncRNA gene predicted gene 28989
Ipo11 13 106794439 to 106936958 142519 - protein coding gene importin 11
Tssr123965 13 106836295 to 106836323 28 - TSS region transcription start site region 123965
Tssr123966 13 106836347 to 106836380 33 - TSS region transcription start site region 123966
Tssr123967 13 106836389 to 106836402 13 - TSS region transcription start site region 123967
Gm28988 13 106851900 to 106853846 1946 + antisense lncRNA gene predicted gene 28988
Tssr123968 13 106936086 to 106936087 1 - TSS region transcription start site region 123968
Cpgi6067 13 106936267 to 106937215 948 CpG island CpG island 6067
Tssr123969 13 106936886 to 106936898 12 - TSS region transcription start site region 123969
Tssr123970 13 106936907 to 106936952 45 - TSS region transcription start site region 123970
Gm48457 13 106945223 to 106945529 306 - pseudogene predicted gene, 48457
Cpgi6068 13 106946736 to 106947589 853 CpG island CpG island 6068
Tssr120949 13 106947104 to 106947164 60 + TSS region transcription start site region 120949
Dimt1 13 106947127 to 106960224 13097 + protein coding gene DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
Kif2a 13 106958996 to 107022126 63130 - protein coding gene kinesin family member 2A
Tssr123971 13 106962027 to 106962031 4 - TSS region transcription start site region 123971
Tssr123972 13 106988408 to 106988414 6 - TSS region transcription start site region 123972
Gm24431 13 106990402 to 106990467 65 - snoRNA gene predicted gene, 24431
D930043N17Rik 13 107011617 to 107012749 1132 unclassified gene RIKEN cDNA D930043N17 gene
Cpgi6069 13 107021375 to 107023044 1669 CpG island CpG island 6069
Tssr123973 13 107021746 to 107021754 8 - TSS region transcription start site region 123973
Tssr123974 13 107021761 to 107021772 11 - TSS region transcription start site region 123974
Tssr123975 13 107022068 to 107022138 70 - TSS region transcription start site region 123975
Tssr123976 13 107022269 to 107022276 7 - TSS region transcription start site region 123976
Tssr123977 13 107022313 to 107022362 49 - TSS region transcription start site region 123977
Tssr123978 13 107022383 to 107022394 11 - TSS region transcription start site region 123978
3830408C21Rik 13 107022570 to 107033518 10948 + lncRNA gene RIKEN cDNA 3830408C21 gene
Tssr120950 13 107034284 to 107034306 22 + TSS region transcription start site region 120950
Gm48684 13 107034284 to 107035217 933 + lincRNA gene predicted gene, 48684
Tssr120951 13 107063671 to 107063682 11 + TSS region transcription start site region 120951
Tssr120952 13 107063690 to 107063701 11 + TSS region transcription start site region 120952
Gm31452 13 107063693 to 107099252 35559 + lincRNA gene predicted gene, 31452
Tssr120953 13 107063719 to 107063736 17 + TSS region transcription start site region 120953
Tssr120954 13 107063737 to 107063755 18 + TSS region transcription start site region 120954
Gm41051 13 107121641 to 107130108 8467 + lncRNA gene predicted gene, 41051
Cpgi6070 13 107121739 to 107121899 160 CpG island CpG island 6070
Gm31715 13 107210533 to 107212526 1993 + lncRNA gene predicted gene, 31715