Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:105054963-106755111

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6063 13 105053639 to 105055040 1401 CpG island CpG island 6063
Cpgi6064 13 105082106 to 105082309 203 CpG island CpG island 6064
Tssr120942 13 105082117 to 105082127 10 + TSS region transcription start site region 120942
4933425L06Rik 13 105082122 to 105121782 39660 + protein coding gene RIKEN cDNA 4933425L06 gene
Rnf180 13 105130567 to 105294818 164251 - protein coding gene ring finger protein 180
D13Mit270 13 105184838 to 105184984 146 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 270
Gm25631 13 105223269 to 105223398 129 - snoRNA gene predicted gene, 25631
Tssr123943 13 105242634 to 105242649 15 - TSS region transcription start site region 123943
Tssr123944 13 105242652 to 105242666 14 - TSS region transcription start site region 123944
Tssr123945 13 105242797 to 105242810 13 - TSS region transcription start site region 123945
Tssr123946 13 105249686 to 105249708 22 - TSS region transcription start site region 123946
Tssr123947 13 105249709 to 105249750 41 - TSS region transcription start site region 123947
Tssr123948 13 105249801 to 105249816 15 - TSS region transcription start site region 123948
Tssr123949 13 105250438 to 105250447 9 - TSS region transcription start site region 123949
Tssr123950 13 105250449 to 105250479 30 - TSS region transcription start site region 123950
Tssr123951 13 105250490 to 105250499 9 - TSS region transcription start site region 123951
D13Mit73 13 105285511 to 105285678 167 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 73
Sgp5 13 105285678 to 56322643 -48963035 QTL serum gp70 production 5
Tssr120943 13 105291621 to 105291626 5 + TSS region transcription start site region 120943
Tssr123952 13 105291914 to 105291938 24 - TSS region transcription start site region 123952
Tssr123953 13 105291952 to 105291974 22 - TSS region transcription start site region 123953
Tssr123954 13 105293004 to 105293015 11 - TSS region transcription start site region 123954
Cpgi6065 13 105293725 to 105294808 1083 CpG island CpG island 6065
Tssr123955 13 105294290 to 105294302 12 - TSS region transcription start site region 123955
Tssr123956 13 105294303 to 105294340 37 - TSS region transcription start site region 123956
Tssr123957 13 105294349 to 105294358 9 - TSS region transcription start site region 123957
Tssr123958 13 105294381 to 105294419 38 - TSS region transcription start site region 123958
Tssr123959 13 105294426 to 105294471 45 - TSS region transcription start site region 123959
Tssr123960 13 105294657 to 105294666 9 - TSS region transcription start site region 123960
Tssr123961 13 105294819 to 105294829 10 - TSS region transcription start site region 123961
Tssr123962 13 105299288 to 105299291 3 - TSS region transcription start site region 123962
Tssr123963 13 105299706 to 105299716 10 - TSS region transcription start site region 123963
Tssr123964 13 105299748 to 105299775 27 - TSS region transcription start site region 123964
Tssr120944 13 105308060 to 105308086 26 + TSS region transcription start site region 120944
Gm41049 13 105311429 to 105324918 13489 + lncRNA gene predicted gene, 41049
Gm31130 13 105409655 to 105432605 22950 + lncRNA gene predicted gene, 31130
Htr1a 13 105443693 to 105448133 4440 + protein coding gene 5-hydroxytryptamine (serotonin) receptor 1A
Cpgi6066 13 105443922 to 105445297 1375 CpG island CpG island 6066
Tssr120945 13 105444261 to 105444271 10 + TSS region transcription start site region 120945
Gm41050 13 105486672 to 105502918 16246 + lncRNA gene predicted gene, 41050
Gm48208 13 105568754 to 105569963 1209 - pseudogene predicted gene, 48208
Acigg6 13 105683731 to 89583537 -16100194 QTL anti COL7 IgG2a/c antibody 6
Gm48211 13 105833453 to 105833678 225 - pseudogene predicted gene, 48211
Gm10739 13 105838547 to 106019783 181236 + lincRNA gene predicted gene 10739
D13Mit74 13 105889813 to 105889961 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 74
Tssr120946 13 105898941 to 105898957 16 + TSS region transcription start site region 120946
Gm48212 13 105901764 to 105902140 376 + pseudogene predicted gene, 48212
D13Mit316 13 105904963 to 105905111 148 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 316
Gm48214 13 106042124 to 106042481 357 + pseudogene predicted gene, 48214
Tssr4162 13 106191409 to 106191411 2 - TSS region transcription start site region 4162
Olfr717-ps1 13 106197216 to 106197771 555 - pseudogene olfactory receptor 717, pseudogene 1
Tssr120947 13 106260622 to 106260627 5 + TSS region transcription start site region 120947
Tssr120948 13 106283144 to 106283156 12 + TSS region transcription start site region 120948
D13Mit75 13 106469902 to 106470062 160 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 75
Gm7054 13 106475936 to 106476755 819 + pseudogene predicted gene 7054
D13Mit227 13 106518220 to 106518384 164 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 227
Gm48216 13 106530998 to 106531817 819 - pseudogene predicted gene, 48216
Dph3b-ps 13 106546815 to 106547060 245 - pseudogene diphthamide biosynthesis 3, pseudogene
Gm45940 13 106712003 to 106722044 10041 - lncRNA gene predicted gene, 45940
Gm30411 13 106747070 to 106761579 14509 - lincRNA gene predicted gene, 30411