Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:10344423-11609945

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26861 13 10359165 to 10673847 314682 + antisense lncRNA gene predicted gene, 26861
Cpgi5271 13 10360077 to 10361200 1123 CpG island CpG island 5271
Tssr121363 13 10360810 to 10360853 43 - TSS region transcription start site region 121363
Chrm3 13 10360847 to 9875486 -485361 - protein coding gene cholinergic receptor, muscarinic 3, cardiac
Tssr121364 13 10360915 to 10360941 26 - TSS region transcription start site region 121364
Tssr121365 13 10360942 to 10360970 28 - TSS region transcription start site region 121365
Gm47407 13 10517687 to 10538811 21124 + lincRNA gene predicted gene, 47407
D13Mit216 13 10533271 to 10533390 119 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 216
Gm36525 13 10539738 to 10557707 17969 - lincRNA gene predicted gene, 36525
Tssr3991 13 10581557 to 10581559 2 + TSS region transcription start site region 3991
Gm23415 13 10592484 to 10592566 82 - miRNA gene predicted gene, 23415
Gm40666 13 10674389 to 10676726 2337 + lncRNA gene predicted gene, 40666
Gm47408 13 10700161 to 10830778 130617 + lincRNA gene predicted gene, 47408
Tssr3992 13 10889046 to 10889047 1 - TSS region transcription start site region 3992
Tssr3993 13 10947419 to 10947420 1 - TSS region transcription start site region 3993
Gm47486 13 10974423 to 10979945 5522 + lincRNA gene predicted gene, 47486
D13Mit304 13 11082352 to 11082454 102 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 304
Tssr118335 13 11345599 to 11345603 4 + TSS region transcription start site region 118335
Gm25496 13 11426779 to 11426898 119 - snoRNA gene predicted gene, 25496
D13Ertd463e 13 11487901 to 11488117 216 DNA segment DNA segment, Chr 13, ERATO Doi 463, expressed
Zp4-ps 13 11522052 to 11525682 3630 + pseudogene zona pellucida glycoprotein 4, pseudogene
Gm47487 13 11523096 to 11523744 648 - unclassified gene predicted gene, 47487
Tssr121366 13 11545400 to 11545401 1 - TSS region transcription start site region 121366
Ryr2 13 11553102 to 12106945 553843 - protein coding gene ryanodine receptor 2, cardiac
Tssr121367 13 11569415 to 11569459 44 - TSS region transcription start site region 121367
Tssr121368 13 11572893 to 11572905 12 - TSS region transcription start site region 121368
Tssr121369 13 11572980 to 11572997 17 - TSS region transcription start site region 121369
Tssr121370 13 11573303 to 11573314 11 - TSS region transcription start site region 121370
Tssr121371 13 11573756 to 11573764 8 - TSS region transcription start site region 121371
Tssr121372 13 11581575 to 11581579 4 - TSS region transcription start site region 121372
Tssr121373 13 11584741 to 11584746 5 - TSS region transcription start site region 121373