Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:103180877-103717279

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mast4 13 102732486 to 103334497 602011 - protein coding gene microtubule associated serine/threonine kinase family member 4
Tbqt5 13 103205109 to 116906680 13701571 QTL tibia bone quality traits 5
D13Mit226 13 103205109 to 103205250 141 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 226
Fbtq6 13 103205109 to 103205250 141 QTL femoral bone trait QTL 6
Tssr123873 13 103300949 to 103300953 4 - TSS region transcription start site region 123873
Tssr120897 13 103332542 to 103332550 8 + TSS region transcription start site region 120897
Tssr120898 13 103332581 to 103332589 8 + TSS region transcription start site region 120898
Tssr120899 13 103332600 to 103332608 8 + TSS region transcription start site region 120899
Cpgi6053 13 103333288 to 103335018 1730 CpG island CpG island 6053
Tssr123874 13 103334429 to 103334500 71 - TSS region transcription start site region 123874
Tssr123875 13 103335821 to 103335826 5 - TSS region transcription start site region 123875
Tssr123876 13 103335942 to 103335954 12 - TSS region transcription start site region 123876
Tssr123877 13 103335961 to 103335968 7 - TSS region transcription start site region 123877
Tssr120900 13 103344880 to 103344881 1 + TSS region transcription start site region 120900
Gm5454 13 103356252 to 103357704 1452 + pseudogene predicted gene 5454
Tssr120901 13 103356401 to 103356410 9 + TSS region transcription start site region 120901
n-R5s56 13 103396202 to 103396306 104 + rRNA gene nuclear encoded rRNA 5S 56
Tssr120902 13 103397067 to 103397069 2 + TSS region transcription start site region 120902
Gm16416 13 103397109 to 103397591 482 + pseudogene predicted gene 16416
Gm24441 13 103420802 to 103421082 280 - unclassified non-coding RNA gene predicted gene, 24441
Gm41079 13 103430877 to 103467279 36402 - lncRNA gene predicted gene, 41079
Tssr123878 13 103467239 to 103467265 26 - TSS region transcription start site region 123878
Gm41047 13 103507258 to 103520175 12917 + lncRNA gene predicted gene, 41047
D13Dcr15 13 103559660 to 103559755 95 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 15
Gm46398 13 103562494 to 103591359 28865 - lncRNA gene predicted gene, 46398
Gm30551 13 103591395 to 103707633 116238 - lincRNA gene predicted gene, 30551
Cpgi6054 13 103592959 to 103593113 154 CpG island CpG island 6054
Gm24870 13 103641926 to 103642032 106 + snRNA gene predicted gene, 24870
Gm6080 13 103657929 to 103658571 642 + pseudogene predicted gene 6080