Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:102727486-103339497

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit287 13 102731487 to 102731598 111 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 287
Mast4 13 102732486 to 103334497 602011 - protein coding gene microtubule associated serine/threonine kinase family member 4
Tssr120892 13 102733128 to 102733147 19 + TSS region transcription start site region 120892
Tssr120893 13 102733255 to 102733266 11 + TSS region transcription start site region 120893
Tssr120894 13 102733325 to 102733345 20 + TSS region transcription start site region 120894
Cpgi6051 13 102736833 to 102736989 156 CpG island CpG island 6051
Tssr120895 13 102741342 to 102741347 5 + TSS region transcription start site region 120895
D13Ertd776e 13 102744321 to 102744533 212 DNA segment DNA segment, Chr 13, ERATO Doi 776, expressed
Tssr120896 13 102760240 to 102760272 32 + TSS region transcription start site region 120896
1700099I09Rik 13 102760255 to 102761896 1641 + antisense lncRNA gene RIKEN cDNA 1700099I09 gene
Tssr4156 13 102762414 to 102762441 27 + TSS region transcription start site region 4156
Gm17160 13 102762435 to 102764785 2350 + antisense lncRNA gene predicted gene 17160
Tssr123855 13 102825172 to 102825176 4 - TSS region transcription start site region 123855
Tssr123856 13 102843964 to 102843968 4 - TSS region transcription start site region 123856
D13Mit290 13 102848530 to 102848679 149 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 290
Tssr123857 13 102894996 to 102895031 35 - TSS region transcription start site region 123857
Tssr123858 13 102901897 to 102901899 2 - TSS region transcription start site region 123858
Tssr123859 13 102905804 to 102905814 10 - TSS region transcription start site region 123859
Tssr123860 13 102905900 to 102905916 16 - TSS region transcription start site region 123860
Tssr123861 13 102905950 to 102905961 11 - TSS region transcription start site region 123861
Tssr123862 13 102906015 to 102906038 23 - TSS region transcription start site region 123862
Tssr123863 13 102906046 to 102906111 65 - TSS region transcription start site region 123863
Tssr123864 13 102906994 to 102907000 6 - TSS region transcription start site region 123864
Gm30106 13 102912096 to 102957913 45817 + lncRNA gene predicted gene, 30106
Tssr123865 13 102958118 to 102958173 55 - TSS region transcription start site region 123865
Tssr123866 13 102958276 to 102958325 49 - TSS region transcription start site region 123866
Tssr123867 13 102969439 to 102969442 3 - TSS region transcription start site region 123867
Tssr123868 13 103006321 to 103006326 5 - TSS region transcription start site region 123868
Tssr123869 13 103038775 to 103038781 6 - TSS region transcription start site region 123869
Tssr123870 13 103047161 to 103047162 1 - TSS region transcription start site region 123870
D13Mit234 13 103061024 to 103061108 84 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 234
Cpgi6052 13 103096652 to 103097155 503 CpG island CpG island 6052
Tssr123871 13 103096818 to 103096869 51 - TSS region transcription start site region 123871
Gm30050 13 103097060 to 103100912 3852 + lncRNA gene predicted gene, 30050
Tssr123872 13 103129620 to 103129623 3 - TSS region transcription start site region 123872
Gm6211 13 103159819 to 103160933 1114 - pseudogene predicted gene 6211
Fbtq6 13 103205109 to 103205250 141 QTL femoral bone trait QTL 6
D13Mit226 13 103205109 to 103205250 141 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 226
Tbqt5 13 103205109 to 116906680 13701571 QTL tibia bone quality traits 5
Tssr123873 13 103300949 to 103300953 4 - TSS region transcription start site region 123873
Tssr120897 13 103332542 to 103332550 8 + TSS region transcription start site region 120897
Tssr120898 13 103332581 to 103332589 8 + TSS region transcription start site region 120898
Tssr120899 13 103332600 to 103332608 8 + TSS region transcription start site region 120899
Cpgi6053 13 103333288 to 103335018 1730 CpG island CpG island 6053
Tssr123874 13 103334429 to 103334500 71 - TSS region transcription start site region 123874
Tssr123875 13 103335821 to 103335826 5 - TSS region transcription start site region 123875
Tssr123876 13 103335942 to 103335954 12 - TSS region transcription start site region 123876
Tssr123877 13 103335961 to 103335968 7 - TSS region transcription start site region 123877