Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:101709040-102099155

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pik3r1 13 101680761 to 101768217 87456 - protein coding gene phosphoinositide-3-kinase regulatory subunit 1
Tssr123844 13 101709682 to 101709703 21 - TSS region transcription start site region 123844
Tssr123845 13 101711808 to 101711810 2 - TSS region transcription start site region 123845
Tssr123846 13 101739914 to 101739919 5 - TSS region transcription start site region 123846
Tssr123847 13 101748542 to 101748546 4 - TSS region transcription start site region 123847
Gm36638 13 101752806 to 101753205 399 - unclassified non-coding RNA gene predicted gene, 36638
Tssr123848 13 101759662 to 101759666 4 - TSS region transcription start site region 123848
Cpgi6047 13 101767035 to 101768916 1881 CpG island CpG island 6047
Tssr123849 13 101768154 to 101768194 40 - TSS region transcription start site region 123849
Tssr120870 13 101773500 to 101773501 1 + TSS region transcription start site region 120870
Cpgi6048 13 101801399 to 101801814 415 CpG island CpG island 6048
Gm19108 13 101841540 to 101842306 766 - pseudogene predicted gene, 19108
Tssr4155 13 101845589 to 101845594 5 + TSS region transcription start site region 4155
Gm47007 13 101855491 to 101856351 860 + lincRNA gene predicted gene, 47007
D13Mit70 13 101861669 to 101861832 163 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 70
D13Mit71 13 101904040 to 101904155 115 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 71
Gm17832 13 101920411 to 101921235 824 + pseudogene predicted gene, 17832
Gm41044 13 101998661 to 102014347 15686 - lncRNA gene predicted gene, 41044
Pbsq1 13 102000000 to 112000000 10000000 QTL percent broken sperm QTL 1
Tssr123850 13 102014314 to 102014331 17 - TSS region transcription start site region 123850
Tssr120871 13 102036207 to 102036214 7 + TSS region transcription start site region 120871