Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:101517605-101867621

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
A130049L09Rik 13 101514603 to 101518269 3666 unclassified gene RIKEN cDNA A130049L09 gene
Tssr120864 13 101533432 to 101533452 20 + TSS region transcription start site region 120864
Tssr123821 13 101538209 to 101538234 25 - TSS region transcription start site region 123821
Tssr123822 13 101538245 to 101538270 25 - TSS region transcription start site region 123822
Gm36475 13 101540559 to 101566823 26264 + lncRNA gene predicted gene, 36475
Gm41043 13 101543777 to 101548152 4375 - lncRNA gene predicted gene, 41043
Tssr120865 13 101545168 to 101545174 6 + TSS region transcription start site region 120865
Gm47533 13 101545206 to 101548279 3073 + lincRNA gene predicted gene, 47533
Tssr123823 13 101548075 to 101548093 18 - TSS region transcription start site region 123823
Tssr123824 13 101548143 to 101548157 14 - TSS region transcription start site region 123824
Tssr4154 13 101555977 to 101555978 1 + TSS region transcription start site region 4154
Gm19010 13 101557231 to 101557831 600 - pseudogene predicted gene, 19010
Gm36553 13 101589833 to 101613282 23449 + lncRNA gene predicted gene, 36553
Gm29341 13 101605618 to 101606233 615 - lincRNA gene predicted gene 29341
Tssr120866 13 101655112 to 101655137 25 + TSS region transcription start site region 120866
Tssr123825 13 101659133 to 101659142 9 - TSS region transcription start site region 123825
Tssr120867 13 101664148 to 101664153 5 + TSS region transcription start site region 120867
Tssr120868 13 101664253 to 101664263 10 + TSS region transcription start site region 120868
Pik3r1 13 101680761 to 101768217 87456 - protein coding gene phosphoinositide-3-kinase regulatory subunit 1
Tssr123826 13 101690567 to 101690587 20 - TSS region transcription start site region 123826
Tssr123827 13 101692110 to 101692114 4 - TSS region transcription start site region 123827
Tssr123828 13 101692286 to 101692299 13 - TSS region transcription start site region 123828
Tssr123829 13 101692313 to 101692329 16 - TSS region transcription start site region 123829
Tssr123830 13 101692332 to 101692384 52 - TSS region transcription start site region 123830
Tssr120869 13 101692478 to 101692499 21 + TSS region transcription start site region 120869
Tssr123831 13 101692498 to 101692509 11 - TSS region transcription start site region 123831
Tssr123832 13 101692563 to 101692600 37 - TSS region transcription start site region 123832
Tssr123833 13 101692605 to 101692621 16 - TSS region transcription start site region 123833
Tssr123834 13 101692624 to 101692638 14 - TSS region transcription start site region 123834
Cpgi6045 13 101694229 to 101694717 488 CpG island CpG island 6045
Tssr123835 13 101694427 to 101694431 4 - TSS region transcription start site region 123835
Tssr123836 13 101694513 to 101694612 99 - TSS region transcription start site region 123836
Tssr123837 13 101694679 to 101694707 28 - TSS region transcription start site region 123837
Tssr123838 13 101694716 to 101694760 44 - TSS region transcription start site region 123838
Cpgi6046 13 101694950 to 101695113 163 CpG island CpG island 6046
Tssr123839 13 101701858 to 101701873 15 - TSS region transcription start site region 123839
Tssr123840 13 101701875 to 101701935 60 - TSS region transcription start site region 123840
Tssr123841 13 101702079 to 101702116 37 - TSS region transcription start site region 123841
Tssr123842 13 101702120 to 101702127 7 - TSS region transcription start site region 123842
Tssr123843 13 101702128 to 101702138 10 - TSS region transcription start site region 123843
Tssr123844 13 101709682 to 101709703 21 - TSS region transcription start site region 123844
Tssr123845 13 101711808 to 101711810 2 - TSS region transcription start site region 123845
Tssr123846 13 101739914 to 101739919 5 - TSS region transcription start site region 123846
Tssr123847 13 101748542 to 101748546 4 - TSS region transcription start site region 123847
Gm36638 13 101752806 to 101753205 399 - unclassified non-coding RNA gene predicted gene, 36638
Tssr123848 13 101759662 to 101759666 4 - TSS region transcription start site region 123848
Cpgi6047 13 101767035 to 101768916 1881 CpG island CpG island 6047
Tssr123849 13 101768154 to 101768194 40 - TSS region transcription start site region 123849
Tssr120870 13 101773500 to 101773501 1 + TSS region transcription start site region 120870
Cpgi6048 13 101801399 to 101801814 415 CpG island CpG island 6048
Gm19108 13 101841540 to 101842306 766 - pseudogene predicted gene, 19108
Tssr4155 13 101845589 to 101845594 5 + TSS region transcription start site region 4155
Gm47007 13 101855491 to 101856351 860 + lincRNA gene predicted gene, 47007
D13Mit70 13 101861669 to 101861832 163 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 70