Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:100954319-101593396

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29502 13 100847433 to 100977915 130482 + lincRNA gene predicted gene 29502
Gm41042 13 100997184 to 101080021 82837 + lncRNA gene predicted gene, 41042
Gm6114 13 101013019 to 101013986 967 - pseudogene predicted gene 6114
Hmgb1-ps9 13 101038602 to 101039246 644 - pseudogene high mobility group box 1, pseudogene 9
Tssr120858 13 101060471 to 101060479 8 + TSS region transcription start site region 120858
Cpgi6044 13 101210265 to 101210446 181 CpG island CpG island 6044
Gm36427 13 101226219 to 101306017 79798 - lncRNA gene predicted gene, 36427
5930438M14Rik 13 101232127 to 101247551 15424 + lincRNA gene RIKEN cDNA 5930438M14 gene
4933416M06Rik 13 101254319 to 101293396 39077 + lncRNA gene RIKEN cDNA 4933416M06 gene
4932411K12Rik 13 101301715 to 101464152 162437 + lincRNA gene RIKEN cDNA 4932411K12 gene
Gm2534 13 101348752 to 101349181 429 + pseudogene predicted gene 2534
4922502H24Rik 13 101391871 to 101397580 5709 - lncRNA gene RIKEN cDNA 4922502H24 gene
Tssr120859 13 101397666 to 101397673 7 + TSS region transcription start site region 120859
D13Mit72 13 101437068 to 101437217 149 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 72
Tssr120860 13 101442428 to 101442439 11 + TSS region transcription start site region 120860
Tssr120861 13 101442444 to 101442448 4 + TSS region transcription start site region 120861
Gm36994 13 101442760 to 101443251 491 - unclassified gene predicted gene, 36994
D13Mit30 13 101452884 to 101453030 146 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 30
Tssr120862 13 101455736 to 101455739 3 + TSS region transcription start site region 120862
Tssr120863 13 101478951 to 101478953 2 + TSS region transcription start site region 120863
A130049L09Rik 13 101514603 to 101518269 3666 unclassified gene RIKEN cDNA A130049L09 gene
Tssr120864 13 101533432 to 101533452 20 + TSS region transcription start site region 120864
Tssr123821 13 101538209 to 101538234 25 - TSS region transcription start site region 123821
Tssr123822 13 101538245 to 101538270 25 - TSS region transcription start site region 123822
Gm36475 13 101540559 to 101566823 26264 + lncRNA gene predicted gene, 36475
Gm41043 13 101543777 to 101548152 4375 - lncRNA gene predicted gene, 41043
Tssr120865 13 101545168 to 101545174 6 + TSS region transcription start site region 120865
Gm47533 13 101545206 to 101548279 3073 + lincRNA gene predicted gene, 47533
Tssr123823 13 101548075 to 101548093 18 - TSS region transcription start site region 123823
Tssr123824 13 101548143 to 101548157 14 - TSS region transcription start site region 123824
Tssr4154 13 101555977 to 101555978 1 + TSS region transcription start site region 4154
Gm19010 13 101557231 to 101557831 600 - pseudogene predicted gene, 19010
Gm36553 13 101589833 to 101613282 23449 + lncRNA gene predicted gene, 36553