Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:100725471-101395479

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdk7 13 100702631 to 100730939 28308 - protein coding gene cyclin-dependent kinase 7
Cpgi6038 13 100730146 to 100730378 232 CpG island CpG island 6038
Cpgi6039 13 100730669 to 100731109 440 CpG island CpG island 6039
Tssr123806 13 100730839 to 100730962 123 - TSS region transcription start site region 123806
Tssr120855 13 100731013 to 100731077 64 + TSS region transcription start site region 120855
Mrps36 13 100735955 to 100744659 8704 - protein coding gene mitochondrial ribosomal protein S36
D13Mit195 13 100739552 to 100739748 196 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 195
Pbwg17 13 100739552 to 100739748 196 QTL postnatal body weight growth 17
Cpgi6040 13 100744069 to 100744769 700 CpG island CpG island 6040
Tssr123807 13 100744089 to 100744129 40 - TSS region transcription start site region 123807
Tssr120856 13 100744204 to 100744240 36 + TSS region transcription start site region 120856
Tssr123808 13 100744588 to 100744663 75 - TSS region transcription start site region 123808
Cenph 13 100759686 to 100775899 16213 - protein coding gene centromere protein H
D13Ertd37e 13 100763117 to 100763364 247 DNA segment DNA segment, Chr 13, ERATO Doi 37, expressed
Tssr120857 13 100770400 to 100770401 1 + TSS region transcription start site region 120857
Gm16335 13 100770464 to 100770772 308 + pseudogene predicted gene 16335
Cpgi6041 13 100775305 to 100776038 733 CpG island CpG island 6041
Tssr123809 13 100775803 to 100775843 40 - TSS region transcription start site region 123809
Tssr123810 13 100775844 to 100775893 49 - TSS region transcription start site region 123810
Ccnb1 13 100778739 to 100786486 7747 - protein coding gene cyclin B1
Tssr123811 13 100780178 to 100780182 4 - TSS region transcription start site region 123811
Cpgi6042 13 100786105 to 100786841 736 CpG island CpG island 6042
Tssr123812 13 100786538 to 100786556 18 - TSS region transcription start site region 123812
Tssr123813 13 100786600 to 100786612 12 - TSS region transcription start site region 123813
Slc30a5 13 100802648 to 100833427 30779 - protein coding gene solute carrier family 30 (zinc transporter), member 5
Cpgi6043 13 100832654 to 100833734 1080 CpG island CpG island 6043
Tssr123814 13 100833183 to 100833200 17 - TSS region transcription start site region 123814
Tssr123815 13 100833218 to 100833248 30 - TSS region transcription start site region 123815
Tssr123816 13 100833277 to 100833312 35 - TSS region transcription start site region 123816
Tssr123817 13 100833315 to 100833367 52 - TSS region transcription start site region 123817
Tssr123818 13 100833369 to 100833445 76 - TSS region transcription start site region 123818
Tssr123819 13 100833447 to 100833470 23 - TSS region transcription start site region 123819
Gm29502 13 100847433 to 100977915 130482 + lincRNA gene predicted gene 29502
Gm41040 13 100863402 to 100863851 449 - lncRNA gene predicted gene, 41040
Gm37830 13 100872780 to 100876195 3415 + unclassified gene predicted gene, 37830
Gm41041 13 100909097 to 100909889 792 - pseudogene predicted gene, 41041
Gm10257 13 100946405 to 100946815 410 - pseudogene predicted gene 10257
Tssr123820 13 100946928 to 100946930 2 - TSS region transcription start site region 123820
Gm41042 13 100997184 to 101080021 82837 + lncRNA gene predicted gene, 41042
Gm6114 13 101013019 to 101013986 967 - pseudogene predicted gene 6114
Hmgb1-ps9 13 101038602 to 101039246 644 - pseudogene high mobility group box 1, pseudogene 9
Tssr120858 13 101060471 to 101060479 8 + TSS region transcription start site region 120858
Cpgi6044 13 101210265 to 101210446 181 CpG island CpG island 6044
Gm36427 13 101226219 to 101306017 79798 - lncRNA gene predicted gene, 36427
5930438M14Rik 13 101232127 to 101247551 15424 + lincRNA gene RIKEN cDNA 5930438M14 gene
4933416M06Rik 13 101254319 to 101293396 39077 + lncRNA gene RIKEN cDNA 4933416M06 gene
4932411K12Rik 13 101301715 to 101464152 162437 + lincRNA gene RIKEN cDNA 4932411K12 gene
Gm2534 13 101348752 to 101349181 429 + pseudogene predicted gene 2534
4922502H24Rik 13 101391871 to 101397580 5709 - lncRNA gene RIKEN cDNA 4922502H24 gene