Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:10030161-11500778

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit215 13 10046277 to 10046502 225 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 215
Gm47411 13 10048667 to 10051848 3181 - unclassified gene predicted gene, 47411
Gm47405 13 10064758 to 10070866 6108 - sense intronic lncRNA gene predicted gene, 47405
D13Mit172 13 10081042 to 10081188 146 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 172
9330159N22Rik 13 10164744 to 10165774 1030 - unclassified gene RIKEN cDNA 9330159N22 gene
Gm47404 13 10175784 to 10180807 5023 - sense intronic lncRNA gene predicted gene, 47404
Gm26861 13 10359165 to 10673847 314682 + antisense lncRNA gene predicted gene, 26861
Cpgi5271 13 10360077 to 10361200 1123 CpG island CpG island 5271
Tssr121363 13 10360810 to 10360853 43 - TSS region transcription start site region 121363
Chrm3 13 10360847 to 9875486 -485361 - protein coding gene cholinergic receptor, muscarinic 3, cardiac
Tssr121364 13 10360915 to 10360941 26 - TSS region transcription start site region 121364
Tssr121365 13 10360942 to 10360970 28 - TSS region transcription start site region 121365
Gm47407 13 10517687 to 10538811 21124 + lincRNA gene predicted gene, 47407
D13Mit216 13 10533271 to 10533390 119 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 216
Gm36525 13 10539738 to 10557707 17969 - lincRNA gene predicted gene, 36525
Tssr3991 13 10581557 to 10581559 2 + TSS region transcription start site region 3991
Gm23415 13 10592484 to 10592566 82 - miRNA gene predicted gene, 23415
Gm40666 13 10674389 to 10676726 2337 + lncRNA gene predicted gene, 40666
Gm47408 13 10700161 to 10830778 130617 + lincRNA gene predicted gene, 47408
Tssr3992 13 10889046 to 10889047 1 - TSS region transcription start site region 3992
Tssr3993 13 10947419 to 10947420 1 - TSS region transcription start site region 3993
Gm47486 13 10974423 to 10979945 5522 + lincRNA gene predicted gene, 47486
D13Mit304 13 11082352 to 11082454 102 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 304
Tssr118335 13 11345599 to 11345603 4 + TSS region transcription start site region 118335
Gm25496 13 11426779 to 11426898 119 - snoRNA gene predicted gene, 25496
D13Ertd463e 13 11487901 to 11488117 216 DNA segment DNA segment, Chr 13, ERATO Doi 463, expressed