Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:100074852-100187690

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bdp1 13 100017994 to 100104070 86076 - protein coding gene B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
D13Die41 13 100074863 to 100075064 201 DNA segment DNA segment, Chr 13, Dietrich 41
D13Die14 13 100075098 to 100075169 71 DNA segment DNA segment, Chr 13, Dietrich 14
Tssr123770 13 100078687 to 100078722 35 - TSS region transcription start site region 123770
Cpgi6029 13 100103569 to 100104181 612 CpG island CpG island 6029
Tssr123771 13 100104027 to 100104053 26 - TSS region transcription start site region 123771
Tssr123772 13 100104064 to 100104082 18 - TSS region transcription start site region 123772
Tssr123773 13 100104083 to 100104094 11 - TSS region transcription start site region 123773
Tssr120839 13 100104209 to 100104212 3 + TSS region transcription start site region 120839
D13Die11 13 100106326 to 100106389 63 DNA segment DNA segment, Chr 13, Dietrich 11
D13Die22 13 100106406 to 100106543 137 DNA segment DNA segment, Chr 13, Dietrich 22
BC001981 13 100106795 to 100108339 1544 - antisense lncRNA gene cDNA sequence BC001981
Cpgi6030 13 100107550 to 100108582 1032 CpG island CpG island 6030
Tssr120840 13 100108007 to 100108012 5 + TSS region transcription start site region 120840
Tssr120841 13 100108014 to 100108143 129 + TSS region transcription start site region 120841
Serf1 13 100108019 to 100114233 6214 + protein coding gene small EDRK-rich factor 1
Tssr120842 13 100108156 to 100108167 11 + TSS region transcription start site region 120842
Tssr123774 13 100108178 to 100108183 5 - TSS region transcription start site region 123774
Tssr123775 13 100109079 to 100109114 35 - TSS region transcription start site region 123775
D13Die13 13 100112322 to 100112522 200 DNA segment DNA segment, Chr 13, Dietrich 13
Tssr123776 13 100113996 to 100114038 42 - TSS region transcription start site region 123776
D13Die6 13 100116252 to 100116375 123 DNA segment DNA segment, Chr 13, Dietrich 6
Cpgi6031 13 100124571 to 100125378 807 CpG island CpG island 6031
Tssr120843 13 100124850 to 100124886 36 + TSS region transcription start site region 120843
Smn1 13 100124852 to 100137690 12838 + protein coding gene survival motor neuron 1
Tssr120844 13 100127929 to 100127942 13 + TSS region transcription start site region 120844
Naip2 13 100144063 to 100202092 58029 - protein coding gene NLR family, apoptosis inhibitory protein 2
Tssr123777 13 100152811 to 100152822 11 - TSS region transcription start site region 123777
D13Die26 13 100152950 to 100153117 167 DNA segment DNA segment, Chr 13, Dietrich 26
Tssr4152 13 100153127 to 100153128 1 + TSS region transcription start site region 4152
Gm18413 13 100153851 to 100154505 654 - pseudogene predicted gene, 18413
Tssr123778 13 100174433 to 100174444 11 - TSS region transcription start site region 123778
Tssr123779 13 100174566 to 100174580 14 - TSS region transcription start site region 123779
D13Die24 13 100186566 to 100186721 155 DNA segment DNA segment, Chr 13, Dietrich 24