Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:100007994-100114070

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr123764 13 100012498 to 100012501 3 - TSS region transcription start site region 123764
D13Die5 13 100013611 to 100013736 125 DNA segment DNA segment, Chr 13, Dietrich 5
Cpgi6028 13 100015272 to 100015915 643 CpG island CpG island 6028
Tssr123765 13 100015532 to 100015543 11 - TSS region transcription start site region 123765
Tssr123766 13 100015562 to 100015647 85 - TSS region transcription start site region 123766
Mccc2 13 100015639 to 99948532 -67107 - protein coding gene methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
Bdp1 13 100017994 to 100104070 86076 - protein coding gene B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
Tssr123767 13 100032174 to 100032185 11 - TSS region transcription start site region 123767
D13Die15 13 100038079 to 100038153 74 DNA segment DNA segment, Chr 13, Dietrich 15
D13Mit146 13 100046310 to 100046417 107 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 146
Tssr123768 13 100066010 to 100066033 23 - TSS region transcription start site region 123768
Tssr123769 13 100067916 to 100067924 8 - TSS region transcription start site region 123769
D430018B14Rik 13 100073216 to 100073741 525 unclassified gene RIKEN cDNA D430018B14 gene
D13Die41 13 100074863 to 100075064 201 DNA segment DNA segment, Chr 13, Dietrich 41
D13Die14 13 100075098 to 100075169 71 DNA segment DNA segment, Chr 13, Dietrich 14
Tssr123770 13 100078687 to 100078722 35 - TSS region transcription start site region 123770
Cpgi6029 13 100103569 to 100104181 612 CpG island CpG island 6029
Tssr123771 13 100104027 to 100104053 26 - TSS region transcription start site region 123771
Tssr123772 13 100104064 to 100104082 18 - TSS region transcription start site region 123772
Tssr123773 13 100104083 to 100104094 11 - TSS region transcription start site region 123773
Tssr120839 13 100104209 to 100104212 3 + TSS region transcription start site region 120839
D13Die11 13 100106326 to 100106389 63 DNA segment DNA segment, Chr 13, Dietrich 11
D13Die22 13 100106406 to 100106543 137 DNA segment DNA segment, Chr 13, Dietrich 22
BC001981 13 100106795 to 100108339 1544 - antisense lncRNA gene cDNA sequence BC001981
Cpgi6030 13 100107550 to 100108582 1032 CpG island CpG island 6030
Tssr120840 13 100108007 to 100108012 5 + TSS region transcription start site region 120840
Tssr120841 13 100108014 to 100108143 129 + TSS region transcription start site region 120841
Serf1 13 100108019 to 100114233 6214 + protein coding gene small EDRK-rich factor 1
Tssr120842 13 100108156 to 100108167 11 + TSS region transcription start site region 120842
Tssr123774 13 100108178 to 100108183 5 - TSS region transcription start site region 123774
Tssr123775 13 100109079 to 100109114 35 - TSS region transcription start site region 123775
D13Die13 13 100112322 to 100112522 200 DNA segment DNA segment, Chr 13, Dietrich 13
Tssr123776 13 100113996 to 100114038 42 - TSS region transcription start site region 123776