Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:98859263-99238006

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eml5 12 98786805 to 98901484 114679 - protein coding gene echinoderm microtubule associated protein like 5
Tssr117280 12 98877757 to 98877761 4 - TSS region transcription start site region 117280
Cpgi4973 12 98900429 to 98901720 1291 CpG island CpG island 4973
Tssr117281 12 98901264 to 98901275 11 - TSS region transcription start site region 117281
Tssr117282 12 98901311 to 98901322 11 - TSS region transcription start site region 117282
Tssr117283 12 98901415 to 98901472 57 - TSS region transcription start site region 117283
Tssr117284 12 98901478 to 98901492 14 - TSS region transcription start site region 117284
Cpgi4974 12 98920408 to 98920719 311 CpG island CpG island 4974
Tssr114655 12 98920531 to 98920553 22 + TSS region transcription start site region 114655
Tssr114656 12 98920567 to 98920619 52 + TSS region transcription start site region 114656
Ttc8 12 98920574 to 98983238 62664 + protein coding gene tetratricopeptide repeat domain 8
Tssr114657 12 98920620 to 98920634 14 + TSS region transcription start site region 114657
Tssr114658 12 98920644 to 98920662 18 + TSS region transcription start site region 114658
Tssr114659 12 98950099 to 98950116 17 + TSS region transcription start site region 114659
Gm47109 12 98991340 to 98993009 1669 - lincRNA gene predicted gene, 47109
Tssr117285 12 99011638 to 99011675 37 - TSS region transcription start site region 117285
Gm40554 12 99024263 to 99073006 48743 + lncRNA gene predicted gene, 40554
Gm47116 12 99033500 to 99063458 29958 - lincRNA gene predicted gene, 47116
Tssr114660 12 99047159 to 99047167 8 + TSS region transcription start site region 114660
Rpl30-ps8 12 99047230 to 99047574 344 + pseudogene ribosomal protein L30, pseudogene 8
D12Mit77 12 99066227 to 99066415 188 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 77
Cpgi4975 12 99084233 to 99084585 352 CpG island CpG island 4975
4930474N09Rik 12 99161277 to 99162808 1531 - lincRNA gene RIKEN cDNA 4930474N09 gene
Tssr117286 12 99162644 to 99162658 14 - TSS region transcription start site region 117286
Tssr117287 12 99162661 to 99162669 8 - TSS region transcription start site region 117287
Tssr117288 12 99172419 to 99172421 2 - TSS region transcription start site region 117288
Foxn3 12 99190078 to 99563582 373504 - protein coding gene forkhead box N3
Tssr117289 12 99194716 to 99194720 4 - TSS region transcription start site region 117289
D12Mit78 12 99202733 to 99202936 203 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 78