Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:98418036-98738046

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr117253 12 98419624 to 98419644 20 - TSS region transcription start site region 117253
Tssr117254 12 98420036 to 98420071 35 - TSS region transcription start site region 117254
Tssr117255 12 98420087 to 98420096 9 - TSS region transcription start site region 117255
Tssr114644 12 98420142 to 98420153 11 + TSS region transcription start site region 114644
Tssr114645 12 98420183 to 98420204 21 + TSS region transcription start site region 114645
Kcnk10 12 98429432 to 98578213 148781 - protein coding gene potassium channel, subfamily K, member 10
Tssr117256 12 98432166 to 98432170 4 - TSS region transcription start site region 117256
5330409N07Rik 12 98444817 to 98448334 3517 - unclassified gene RIKEN cDNA 5330409N07 gene
Tssr114646 12 98445526 to 98445530 4 + TSS region transcription start site region 114646
Tssr114647 12 98445978 to 98446004 26 + TSS region transcription start site region 114647
Gm40893 12 98523844 to 98526583 2739 + antisense lncRNA gene predicted gene, 40893
Tssr117257 12 98528701 to 98528708 7 - TSS region transcription start site region 117257
Tssr117258 12 98528752 to 98528764 12 - TSS region transcription start site region 117258
Tssr117259 12 98572366 to 98572370 4 - TSS region transcription start site region 117259
Cpgi4965 12 98573821 to 98575622 1801 CpG island CpG island 4965
Tssr117260 12 98574539 to 98574558 19 - TSS region transcription start site region 117260
Tssr117261 12 98574574 to 98574586 12 - TSS region transcription start site region 117261
Tssr117262 12 98574685 to 98574719 34 - TSS region transcription start site region 117262
Tssr117263 12 98574728 to 98574741 13 - TSS region transcription start site region 117263
Tssr117264 12 98574748 to 98574775 27 - TSS region transcription start site region 117264
Tssr117265 12 98575035 to 98575048 13 - TSS region transcription start site region 117265
Cpgi4966 12 98577976 to 98578200 224 CpG island CpG island 4966
Tssr117266 12 98578036 to 98578046 10 - TSS region transcription start site region 117266
Tssr117267 12 98578106 to 98578121 15 - TSS region transcription start site region 117267
Gm47346 12 98582364 to 98585976 3612 - unclassified gene predicted gene, 47346
Gm25486 12 98599033 to 98599095 62 + snRNA gene predicted gene, 25486
Tssr117268 12 98606813 to 98606818 5 - TSS region transcription start site region 117268
Cpgi4967 12 98627990 to 98628436 446 CpG island CpG island 4967
Tssr114648 12 98628126 to 98628202 76 + TSS region transcription start site region 114648
Spata7 12 98628157 to 98669815 41658 + protein coding gene spermatogenesis associated 7
Tssr114649 12 98628207 to 98628235 28 + TSS region transcription start site region 114649
Gm47370 12 98642225 to 98644053 1828 + unclassified gene predicted gene, 47370
Gm47372 12 98648938 to 98652481 3543 - unclassified gene predicted gene, 47372
Tssr3916 12 98650762 to 98650771 9 + TSS region transcription start site region 3916
Ptpn21 12 98676741 to 98737405 60664 - protein coding gene protein tyrosine phosphatase, non-receptor type 21
Cpgi4968 12 98677484 to 98677660 176 CpG island CpG island 4968
Tssr117269 12 98683684 to 98683693 9 - TSS region transcription start site region 117269
Tssr117270 12 98683697 to 98683706 9 - TSS region transcription start site region 117270
Tssr117271 12 98683726 to 98683746 20 - TSS region transcription start site region 117271
Tssr117272 12 98683766 to 98683783 17 - TSS region transcription start site region 117272
Cpgi4969 12 98689172 to 98689563 391 CpG island CpG island 4969
Tssr117273 12 98733906 to 98733936 30 - TSS region transcription start site region 117273
Cpgi4970 12 98734510 to 98734748 238 CpG island CpG island 4970
Tssr117274 12 98734627 to 98734693 66 - TSS region transcription start site region 117274
Cpgi4971 12 98736964 to 98737922 958 CpG island CpG island 4971
Tssr117275 12 98737501 to 98737515 14 - TSS region transcription start site region 117275
Tssr117276 12 98737527 to 98737539 12 - TSS region transcription start site region 117276
Tssr117277 12 98737548 to 98737567 19 - TSS region transcription start site region 117277
Tssr117278 12 98737593 to 98737616 23 - TSS region transcription start site region 117278