Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:94752313-96632324

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm18504 12 94757575 to 94758503 928 + pseudogene predicted gene, 18504
Gm48011 12 94814075 to 94814481 406 - pseudogene predicted gene, 48011
Gm4808 12 94914480 to 94915682 1202 - pseudogene predicted gene 4808
D12Mit165.3 12 95041611 to 95041745 134 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 165.3
D12Mit165 12 95041756 to 95041905 149 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 165
Tssr114604 12 95162838 to 95162839 1 + TSS region transcription start site region 114604
D12Ertd247e 12 95236592 to 95236814 222 DNA segment DNA segment, Chr 12, ERATO Doi 247, expressed
Tssr117234 12 95292718 to 95292725 7 - TSS region transcription start site region 117234
Gm48013 12 95324907 to 95325319 412 + pseudogene predicted gene, 48013
Gm26055 12 95378845 to 95378951 106 - snRNA gene predicted gene, 26055
Gm40551 12 95530025 to 95558892 28867 - lncRNA gene predicted gene, 40551
Gm22246 12 95619818 to 95619924 106 + snRNA gene predicted gene, 22246
Rpl17-ps2 12 95684196 to 95684727 531 + pseudogene ribosomal protein L17, pseudogene 2
Cpgi4959 12 95691949 to 95692604 655 CpG island CpG island 4959
Tssr114605 12 95692195 to 95692207 12 + TSS region transcription start site region 114605
Tssr114606 12 95692212 to 95692246 34 + TSS region transcription start site region 114606
Flrt2 12 95692226 to 95785215 92989 + protein coding gene fibronectin leucine rich transmembrane protein 2
Tssr114607 12 95692248 to 95692258 10 + TSS region transcription start site region 114607
Tssr114608 12 95692313 to 95692324 11 + TSS region transcription start site region 114608
Tssr114609 12 95692329 to 95692344 15 + TSS region transcription start site region 114609
Cpgi4960 12 95694032 to 95694321 289 CpG island CpG island 4960
Cpgi4961 12 95694937 to 95696109 1172 CpG island CpG island 4961
Tssr114610 12 95695190 to 95695195 5 + TSS region transcription start site region 114610
Tssr114611 12 95695350 to 95695365 15 + TSS region transcription start site region 114611
Tssr114612 12 95695392 to 95695397 5 + TSS region transcription start site region 114612
Tssr114613 12 95695426 to 95695446 20 + TSS region transcription start site region 114613
Tssr114614 12 95695456 to 95695508 52 + TSS region transcription start site region 114614
Tssr114615 12 95695513 to 95695526 13 + TSS region transcription start site region 114615
Tssr114616 12 95701112 to 95701119 7 + TSS region transcription start site region 114616
Tssr114617 12 95703030 to 95703058 28 + TSS region transcription start site region 114617
Tssr114618 12 95709702 to 95709706 4 + TSS region transcription start site region 114618
Gm48014 12 95724956 to 95726255 1299 + unclassified gene predicted gene, 48014
Tssr114619 12 95728330 to 95728342 12 + TSS region transcription start site region 114619
Gm48015 12 95734110 to 95735409 1299 + unclassified gene predicted gene, 48015
Tssr114620 12 95740194 to 95740198 4 + TSS region transcription start site region 114620
Tssr114621 12 95747124 to 95747128 4 + TSS region transcription start site region 114621
Tssr114622 12 95748052 to 95748066 14 + TSS region transcription start site region 114622
Tssr114623 12 95750243 to 95750257 14 + TSS region transcription start site region 114623
Tssr114624 12 95750325 to 95750336 11 + TSS region transcription start site region 114624
Tssr114625 12 95750419 to 95750432 13 + TSS region transcription start site region 114625
D12Mit164 12 95755689 to 95755828 139 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 164
Tssr114626 12 95760411 to 95760417 6 + TSS region transcription start site region 114626
Tssr114627 12 95779079 to 95779084 5 + TSS region transcription start site region 114627
Tssr114628 12 95780593 to 95780607 14 + TSS region transcription start site region 114628
Tssr114629 12 95780780 to 95780794 14 + TSS region transcription start site region 114629
Tssr114630 12 95782607 to 95782610 3 + TSS region transcription start site region 114630
1700019M22Rik 12 96046767 to 96047120 353 - pseudogene RIKEN cDNA 1700019M22 gene
Tssr117235 12 96047144 to 96047161 17 - TSS region transcription start site region 117235
Tssr3913 12 96047178 to 96047183 5 - TSS region transcription start site region 3913
Tssr3914 12 96047196 to 96047199 3 - TSS region transcription start site region 3914
Gm47394 12 96229152 to 96229363 211 - pseudogene predicted gene, 47394
Gm26480 12 96255941 to 96256237 296 - unclassified non-coding RNA gene predicted gene, 26480
Gm47395 12 96292422 to 96293214 792 + pseudogene predicted gene, 47395